Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03277 ATGATAGCTTGCTTTGAACCCTTCGTTCACGGAAACGACACAGAATCAACTCCAAACGACGACGTATCTTCCCTCCAAACCTCTTTCCATTTCGGCCCAAACGCAATCGCAACCAAAGACTTCGGCGGCATGAAATCCTCCAACCCTCTCGCCGTAATCCGTCCCATCTCCACCGCCGACGTGGCAAGAGCAGTCAAAGCAGCAACAACAATAAAAAACCTCACGGTTGCGCCACGTGGCAACGGCCACTCTATCAACGGCCAATCCATGGCTGAAAAAGGACTCGTCCTCGACATGCGCGCTTTAGCAGAGGAACATTTTCAACTCCTCTGTATAGAAGGTGTTCCGTACGTCGACGTTTCTGGAGGGGCATTATGGGAAGAAGTGTTGAAACGGTGCGTTTCGCAGTTTCAACTTGCTCCTAGGTCGTGGACTGATTATCTCGGGTTAACGGTGGGTGGAACGCTTTCTAACGCCGGCGTTAGTGGTCAGACTTTCCGTTACGGTCCTCAAACGGCAAACGTAACGGAATTAGAAGTCGTTACTGGTAAAGGCGAAACTTTTGTTTGCTCCGAAAATCAAAATTCAGAGCTTTTTTTTGCCACGCTCGGTGGTCTTGGACAGTTTGGCATCATAACTAGAGCCAGAATCGTTCTTCAAAAATCCCCTGATATGGTGAGATGGATAAGGGTGGTTTACTCGGAATTTGAGGACTATACTAGAGATGCAGAGTGGCTGGTAACTTTGCCAGAAGGTGACGGTTTTGATTACGTGGAAGGGTTCGTTGTGGCTAACAATGATGACCCATGTAATGGATGGCCCACAATTCCGATGGGTTCGAACCAGATGTTCGACCCGGTTCGTTTACCTTCAGAAGCTGGACCGGTTATCTATTGCTTAGAACTTGCTCTTCACTACCGTAAAACAGCTCGATCTTCAGATGTCGATATGAAAGTGGATAGATTACTTGGACGGCTGAGATTCGTTGAGGGTATAAAATTCGAGGATGATGTGAAGTACATGGATTTTTTGCTACGTGTAAAGCGTGTGGAGGAAGATGCAAAAGCGAAAGGAATATGGGATGCACCACATCCATGGTTGAACATGTTTGTGTCCAAGTCCAACATCGCTGATTTTGATCATGAAGTGTTCAAGAAAATCCTCAAACACGGGATCGGTGGTCCCATTCTAGTCTACCCACTATTGCGAAGCAAGTGGGATGATAGACACTCGGTAGTGGTGCCTACAGACAGCAACATCTTCTACATAATAGCATTGCTACGATTTATTCCACCACCACCAAAGGGACCACCTACTGATAAATTGGTGGCACAAAACAATGCCATTATTCAACTGTGTTACAATAAAGGATTTAATTTCAAGTTATATCTTCCTCACTATCACTCACAGGAGAACTGGATACGCCACTTTGGGGAGGATAAATGGACTAGATTCCTACACAGAAAACAAAATTTTGATCCATTGGCTATTCTTGCACCTGGACAGAAATTATTTTCCAGAAACAACTCACataataataataataataataataatTAA 1560 0.4481 MIACFEPFVHGNDTESTPNDDVSSLQTSFHFGPNAIATKDFGGMKSSNPLAVIRPISTADVARAVKAATTIKNLTVAPRGNGHSINGQSMAEKGLVLDMRALAEEHFQLLCIEGVPYVDVSGGALWEEVLKRCVSQFQLAPRSWTDYLGLTVGGTLSNAGVSGQTFRYGPQTANVTELEVVTGKGETFVCSENQNSELFFATLGGLGQFGIITRARIVLQKSPDMVRWIRVVYSEFEDYTRDAEWLVTLPEGDGFDYVEGFVVANNDDPCNGWPTIPMGSNQMFDPVRLPSEAGPVIYCLELALHYRKTARSSDVDMKVDRLLGRLRFVEGIKFEDDVKYMDFLLRVKRVEEDAKAKGIWDAPHPWLNMFVSKSNIADFDHEVFKKILKHGIGGPILVYPLLRSKWDDRHSVVVPTDSNIFYIIALLRFIPPPPKGPPTDKLVAQNNAIIQLCYNKGFNFKLYLPHYHSQENWIRHFGEDKWTRFLHRKQNFDPLAILAPGQKLFSRNNSHNNNNNNNN 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03277 519 Pfam FAD binding domain 49 191 IPR006094 GO:0050660
Car04g03277 519 Gene3D - 99 224 IPR016169 -
Car04g03277 519 ProSiteProfiles PCMH-type FAD-binding domain profile. 45 222 IPR016166 GO:0071949
Car04g03277 519 Gene3D - 37 505 IPR016167 -
Car04g03277 519 Gene3D - 226 463 IPR016170 -
Car04g03277 519 PANTHER CYTOKININ DEHYDROGENASE 7 31 510 - -
Car04g03277 519 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 223 505 IPR015345 GO:0009690|GO:0019139|GO:0050660
Car04g03277 519 SUPERFAMILY FAD-linked oxidases, C-terminal domain 223 505 IPR016164 GO:0003824|GO:0050660
Car04g03277 519 PANTHER GULONOLACTONE OXIDASE 31 510 - -
Car04g03277 519 SUPERFAMILY FAD-binding/transporter-associated domain-like 36 219 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03277 Car-Chr4 61228144 61233149 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03277 K00279 - gmx:100783374 839.336