Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03274 ATGGGAGAGGCTCCAGAAATGTTGTATGTTAATGGGTTCTCAAAGTTTGTGTTTTTTTTGAAAAAGCAGTTGTCAAAGTTTGTTCTTGAAACTGAGAAAACAAATCATGGCAACAACGTTGATGATTCTTCCACTTGGTACGAGGAAGTCATCGATGATGATCTCAAATGGTCTTTTAAACTCAACAGTGTGCTTCATAAAGCGATTAGTGAATACCAGGACATTGCTCTCTTAGATACAAAGCGTTTTGGAAAGGCCTTGGTGCTTGACGGGAAGATGCAGAGTGCTGAAGCAGATGAATTCATTTATCATGAATGCTTGATCCATCCCTCTCTTTTATGTCATCCCAACCCCAAGACAGTGTTTATAATGGGAGGTGGTGAAGGTTCTGCAGCTAGAGAAGCCCTCAAGCACAAGTCAATGGACAAAGTTGTTATGTGTGATATTGACAAGGAGGTGGTAGATTTCTGTCGAAAATACTTGGTTGCAAATAGGGACGCATTTGCTAACAAGAAGCTCGACCTTGTCATCAATGATGCCAAGGTTGAGCTAGAGAAGAGAAAGGAGAAATTTGATATCATTGTTGGAGATTTGGCTGACCCACTTGAAGATGGGCCTTGCTATCAACTCTACACAAAGTCCTTTTATGAGAAAGTAGTGAAGCCCAAACTAAATAAGAATGGTATTTTTGTGACCCAGGCTGGACCAACGGGTATCTTCACACACAAAGAGGTCTTCACTACTATACATAACACCATAAAACAGGTGTTCAAATATGTTGTGGCATACACGACTTATATACCATCATTTGCTGATTCATGGGGATGGGTTATGGCTTCAGACCAACCAATATTGATTGATGCTATGGAAATGGACAAAAGAATCGAAAGAAGAATAGATGGGAAATTGTTGTATCTAGATGGTGCTTGGTTCCATTCATCTACAATCATGAACAAGACCGTGTCCAAATCGCTCCAAAATGAAACTAATGTGTACACTGAAGAAAATGCTAGATTTATTCCAGGACATGGTGTGGCTTCTTATCGTCTCTAA 1053 0.3998 MGEAPEMLYVNGFSKFVFFLKKQLSKFVLETEKTNHGNNVDDSSTWYEEVIDDDLKWSFKLNSVLHKAISEYQDIALLDTKRFGKALVLDGKMQSAEADEFIYHECLIHPSLLCHPNPKTVFIMGGGEGSAAREALKHKSMDKVVMCDIDKEVVDFCRKYLVANRDAFANKKLDLVINDAKVELEKRKEKFDIIVGDLADPLEDGPCYQLYTKSFYEKVVKPKLNKNGIFVTQAGPTGIFTHKEVFTTIHNTIKQVFKYVVAYTTYIPSFADSWGWVMASDQPILIDAMEMDKRIERRIDGKLLYLDGAWFHSSTIMNKTVSKSLQNETNVYTEENARFIPGHGVASYRL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03274 350 Gene3D Vaccinia Virus protein VP39 97 348 IPR029063 -
Car04g03274 350 Pfam Spermine/spermidine synthase domain 100 276 - -
Car04g03274 350 Gene3D Spermidine synthase, tetramerisation domain 44 96 IPR037163 -
Car04g03274 350 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 44 325 IPR029063 -
Car04g03274 350 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 44 281 IPR030374 -
Car04g03274 350 Hamap Polyamine aminopropyltransferase [speE]. 45 326 IPR001045 GO:0003824
Car04g03274 350 PANTHER BNAA02G04280D PROTEIN 1 347 - -
Car04g03274 350 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 1 347 - -
Car04g03274 350 Pfam Spermidine synthase tetramerisation domain 46 97 IPR035246 -
Car04g03274 350 CDD AdoMet_MTases 125 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03274 Car-Chr4 61167056 61173236 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03274 K18787 - gmx:100815510 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03274 04 61167056 61173236 Car04g03274 04 61167056 61173236 ECH