Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03259 ATGAGTTTATCTAAGAAAGGATCTTCAACAGACACCAAACTGAGCTCGCCCAACAAGGCAACATCTTTGAATCCGAATGCAGCAGAGTTTATTCCATTTTCCCTCAGATCATTGCCATCTGGAAGTACTAGCTCGGTAGATGCATCAACAAGGCTTACAACTTCCGGTTCTATTGGTAAAGCAGTTTTAGATCGAACAGAATCGTCAATTTCAAATAATTCTGACGATGAGGCTCACCGGTACTGGCGTTGTCAACTCCCCGATGATATCACCCCGGACTTCAAGCACCTTAATGGAAACTCCTTTGCTGATAAGTTAAGGTTTTCCAATTCAACCTACAGGGAGGAACCATCTTCAGCAAGCTTTTTGAGCTCATTGGCAAAGCCTTGGGATGGACCGATTGGGAATACCAACCTTCATGTTAACAGTGGTCAAGAGGCACTAGCTTATGATGACAATGCTTCACATGGATTCTTAAACGATGTTTTGACTGAGAATGCTATCGTGGACGAAACTGATTTTAACCCTTTGGAATTTTTAGCTTCTCTATTCCCTGGTTTCGCATCAGAAAGCCTTGCTGAAGTTTACTTTGCCAACGGATGCGATCTACATCTTACCGTTGAGATGCTCACTCAGTTAGAGATACAAGTTGATGGTAATTTCGGCCACAACCCGAGTCCAAAGACTCTGTCATCTCCCAATCTGACTGCAATGGACTTTCCAGCACTTGCTCCAACAAATGGCCAGACTACTGGTGCAAAATATGCTGCGGATAATGTTCAACAAAGTGGAAGTCCTTACTTATCGTCCGCCAAAGATTTGCTCATGTTCAAAACTAGCTCTTCTATTCCATCTAGAGGCGCTACCGACTTTGCTACAGCGGTCAGGAAATTGGCTTCTCAGGATTCTGGAATATGGAAGTATGATAGAAATGGTTCCGGTGATGCTTCCACTGGATCAAGTAGGAGTTTAAATGTTCTCGCTAGTGCCTACAATGGTGGACAGGGGAGAGCTAACCTTGGTGATAGATTACAGAACCGTGGTTCTGCTCGAGCAGCTCCTGTTTGGCTCGAAACTGGTGATTCCGTTGCAAATATGTATTCTGAACTACGGGAGGAGGCTCGTGATCATGCACGCTTACGTAATGCATATTTTGAGCAGGCGCGGCAAGCCTACCTTATTGGCAATAAGGCCCTTGCAAAGGAACTAAGTGCGAAAGGGCAACTGCATAACATGCATATGAAAGAAGCTCATGGGAAAGCTCAAGAATCTATTTACCGCCAGAGGAATCCTGTTGCTCCAGAGATGCAGGTTAACGGAAGAGGACATGAGAGAATGATAGACCTCCATGGACTCCATGTAAGTGAAGCGATTCACGTGCTGAAACATGAATTGAATGTGCTAAGAAGCACAGCCAGAGCTGCGGAGCAGCGTTTTCCGGTATATATCTGTGTCGGTACCGGCCATCATACCAGAGGTTCCCGCACTCCTGCTAGACTTCCGATAGCTGTACAGCGTTATCTACTCGAAGAAGAGGGCCTTGATTTCATAGAACCGCAGCCGGGCCTGATTCGTGTTGTGATATATTGA 1590 0.4541 MSLSKKGSSTDTKLSSPNKATSLNPNAAEFIPFSLRSLPSGSTSSVDASTRLTTSGSIGKAVLDRTESSISNNSDDEAHRYWRCQLPDDITPDFKHLNGNSFADKLRFSNSTYREEPSSASFLSSLAKPWDGPIGNTNLHVNSGQEALAYDDNASHGFLNDVLTENAIVDETDFNPLEFLASLFPGFASESLAEVYFANGCDLHLTVEMLTQLEIQVDGNFGHNPSPKTLSSPNLTAMDFPALAPTNGQTTGAKYAADNVQQSGSPYLSSAKDLLMFKTSSSIPSRGATDFATAVRKLASQDSGIWKYDRNGSGDASTGSSRSLNVLASAYNGGQGRANLGDRLQNRGSARAAPVWLETGDSVANMYSELREEARDHARLRNAYFEQARQAYLIGNKALAKELSAKGQLHNMHMKEAHGKAQESIYRQRNPVAPEMQVNGRGHERMIDLHGLHVSEAIHVLKHELNVLRSTARAAEQRFPVYICVGTGHHTRGSRTPARLPIAVQRYLLEEEGLDFIEPQPGLIRVVIY 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03259 529 MobiDBLite consensus disorder prediction 1 24 - -
Car04g03259 529 SUPERFAMILY SMR domain-like 445 527 IPR036063 -
Car04g03259 529 SMART SMR_2 444 529 IPR002625 -
Car04g03259 529 Gene3D - 414 528 IPR036063 -
Car04g03259 529 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 96 529 - -
Car04g03259 529 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 97 - -
Car04g03259 529 Coils Coil 458 478 - -
Car04g03259 529 SMART DUF1771_2 366 431 IPR013899 -
Car04g03259 529 Pfam Domain of unknown function (DUF1771) 367 430 IPR013899 -
Car04g03259 529 ProSiteProfiles Smr domain profile. 447 529 IPR002625 -
Car04g03259 529 CDD CUE_CID7_like 175 216 IPR041806 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03259 - - gmx:100796128 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03259 04 61031027 61035699 Car04g03259 04 61031027 61035699 ECH