Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03245 ATGTTTAACCCCACCGCAGGTGTTACTAAAGAACCCAGTGCGGTTCTCGATTTAGGTTCCCAAATTGGGCGTTTCAACATCGATACGTCGTCGTTTCTAAACTTAACTTCCGAAGCTTGTTCGCCAATCTCCAATTTCTTGTACTTCAACAACGTAGCGCGTGGAGCAAAACGCACCGTTTCGTTGAGTTTGAAGGCTGGTGGAGGGTACAAGTTCAGGAACATTTTTCACGATTTTAACAGAGCTGTTAGGTTTCACTGTGAGAGGATTCCGATCGGGTTTGCTTCGTTGCAAATTggtaacggggacggtaatgatggttataacggtaacggtgagggggatggtaacggtGTTGGAGGGAACGGGAATGGTACTATTGTGGAAGATGATGGGTTGAAATTGAATGGTGGTGATCGTGAGAAACCTAAAAAAGTTTTGATTTTGATGAGTGATACTGGTGGTGGTCATCGTGCTTCTGCTGAAGCTATTAAAGCTGCTTTCTATGAAGAATATGGCGACGAATACCAGGTGTTTGTTACTGATTTGTGGTCTGAACACACACCTTGGCCATTCAATCAATTGCCCAGGAGCTATAGCTTTTTGGTGAAACATGGACCATTGTGGAAGATGACCTATTATGGAACTGCTCCACGTCTAGTTCATCAGTCCAATTTCGCCGCAACTTCAACATTCATAGCTCGTGAAGTTGCTAAAGGGTTAATGAAGTATCAACCTGATATAATAATCAGCGTGCATCCACTAATGCAACACGTTCCACTTCGTATTTTGAGGTCAAGGGGCCTTTTAAAGAAGATTGTTTTTACCACAGTTATTACAGATTTGAGCACTTGCCATCCAACATGGTTTCACAAGCTTGTAACTAGATGCTATTGTCCAACTACAGATGTTGCAAAAAGGGCACAAAAAGCCGGTCTTGAACAATCCCAAATAAAGATTTATGGCCTACCTGTTAGACCTTCCTTTATTAAGCCTGTTCGGCCGAAGGATGAGCTGAGGAAGGAATTAGGAATGGATGAGGATCTTCCTGCTGTATTATTGATAGGGGGAGGTGAAGGCATGGGTCCCATTGAGGCCACTGCTCGGGCACTCGGTGATTTATTAAATGACGAGGGGGTTCCCACTGGCCAGATCCTTGTGATCTGTGGTCGCAATAAGAAGCTTGCTAACAAACTCAGTTCTATTGACTGGAAGATTCCTGTGAAGGTCAAGGGGTTTGTTACTAAAATTGAGGAATGCATGGGTGCCTGTGATTGCATTATTACAAAGGCAGGCCCAGGGACAATTGCAGAGGCCATGATTCGAGGCCTACCTATTATTTTGAATGATTACATTGCCGGGCAGGAAGCCGGCAATGTTCCCTATGTAGTTGAAAATGGATGTGGAAAGTACTCTAAATCGCCTAAAGAGATAGCAACAATTGTTGCAGACTGGTTTGGTCCAAAAGCCGACGAACTAAAAACAATGTCTCAAAATGCACTGAGGCAAGCTAGACCAGATGCCGTGTTCAAGATTGTTCATGACCTTCACGATCTAGTAAGACAAAGAAGGTTATTACTAGATTATTCTTGTACAGCTTGA 1602 0.4182 MFNPTAGVTKEPSAVLDLGSQIGRFNIDTSSFLNLTSEACSPISNFLYFNNVARGAKRTVSLSLKAGGGYKFRNIFHDFNRAVRFHCERIPIGFASLQIGNGDGNDGYNGNGEGDGNGVGGNGNGTIVEDDGLKLNGGDREKPKKVLILMSDTGGGHRASAEAIKAAFYEEYGDEYQVFVTDLWSEHTPWPFNQLPRSYSFLVKHGPLWKMTYYGTAPRLVHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRSRGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTTDVAKRAQKAGLEQSQIKIYGLPVRPSFIKPVRPKDELRKELGMDEDLPAVLLIGGGEGMGPIEATARALGDLLNDEGVPTGQILVICGRNKKLANKLSSIDWKIPVKVKGFVTKIEECMGACDCIITKAGPGTIAEAMIRGLPIILNDYIAGQEAGNVPYVVENGCGKYSKSPKEIATIVADWFGPKADELKTMSQNALRQARPDAVFKIVHDLHDLVRQRRLLLDYSCTA 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03245 533 Gene3D Glycogen Phosphorylase B; 335 502 - -
Car04g03245 533 CDD GT28_Beta-DGS-like 146 521 - -
Car04g03245 533 PANTHER MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 1, CHLOROPLASTIC 87 522 - -
Car04g03245 533 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 144 519 - -
Car04g03245 533 Pfam Glycosyltransferase family 28 C-terminal domain 383 470 IPR007235 GO:0016758
Car04g03245 533 Pfam Monogalactosyldiacylglycerol (MGDG) synthase 157 325 IPR009695 GO:0009247|GO:0016758
Car04g03245 533 PANTHER MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 87 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03245 Car-Chr4 60854831 60860860 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03245 1 533 Glycosyltransferase AT4G31780 66.491 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03245 K03715 - gmx:100804814 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03245 04 60854831 60860860 Car04g03245 04 60854831 60860860 ECH