Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03156 ATGGATTCTATGAAAGAAGAAGCAAAATGTGTATGGATACATGGACCTATCATAGTAGGTGCTGGTCCATCAGGTATAGCAGTAGCAGCTTGTTTATCAAAACAAGGTATTCCAAACGTGATTCTAGAGAGAAGTGATTGTATAGCTTCACTCTGGCAAAACAGAACTTATGACCGTCTTAAACTTCACCTCCCAAAACACTTTTGTGAACTTCCTTTCATGAATTTTCCTACAAATTTTCCTCAATACCCAACAAAACATCAGTTCATTTCATACATGGAATCCTATGCAACACACTTTTCGATTACTCCTAGGTTCAATCAAACTGTAGTTAGTGCTGAGTTTGATTCATGTTCTGAGATTTGGGTTGTCAAAACTCAAGATAATTTTAGTTACTTTTCACCTTGGCTTGTTGTTGCTAGTGGAGAAAATGCTGAACCTGTTGTTCCTAAGATTCATGGTTTGGAACATTTTCATGGTCCTGTTTCACATACAAGTGTTTATAAATCTGGTTCTGAGTATAAGAATAAAAAGGTTTTGGTCATTGGTTGTGGTAATTCTGGAATGGAAGTTAGCTTGGACCTTTGTAGACACAATGCTATTCCTCATTTGGTTGCAAGAAATACAGTACATATTCTTCCAAGAGATATGTTTGGTTTCTCAACATATGGAGTAGCTATGGCATTATATAAATGGCTTCCATTAAAATTAGTAGACAAGTTTCTCTTGTTGGTGACAAGTTTCATTTTGGGAAACACCAATCACTATGGTATCAAAAGGCCTAAAACTGGACCAATAGAGCTTAAACTTGCAACAGGAAAAACTCCAGTACTTGATGTTGGTCAAATATCACAAATTAAATCCGGTAACATTAAGGTGATGGAAGGTGTGAAGGAGATAACAAGAAATGGTGCAAAATTTTTGGATGGAAAAGAAAAGGAATTTGATGCAATAATATTAGCAACAGGGTACAAGAGCAATGTTCCTAGTTGGCTCAAGGTTAAAAAttga 1011 0.3581 MDSMKEEAKCVWIHGPIIVGAGPSGIAVAACLSKQGIPNVILERSDCIASLWQNRTYDRLKLHLPKHFCELPFMNFPTNFPQYPTKHQFISYMESYATHFSITPRFNQTVVSAEFDSCSEIWVVKTQDNFSYFSPWLVVASGENAEPVVPKIHGLEHFHGPVSHTSVYKSGSEYKNKKVLVIGCGNSGMEVSLDLCRHNAIPHLVARNTVHILPRDMFGFSTYGVAMALYKWLPLKLVDKFLLLVTSFILGNTNHYGIKRPKTGPIELKLATGKTPVLDVGQISQIKSGNIKVMEGVKEITRNGAKFLDGKEKEFDAIILATGYKSNVPSWLKVKN 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03156 336 SUPERFAMILY FAD/NAD(P)-binding domain 176 333 IPR036188 -
Car04g03156 336 PRINTS Pyridine nucleotide disulphide reductase class-II signature 15 37 - -
Car04g03156 336 PRINTS Pyridine nucleotide disulphide reductase class-II signature 174 198 - -
Car04g03156 336 Pfam Pyridine nucleotide-disulphide oxidoreductase 17 209 - -
Car04g03156 336 PRINTS FAD-dependent pyridine nucleotide reductase signature 16 35 - -
Car04g03156 336 PRINTS FAD-dependent pyridine nucleotide reductase signature 178 196 - -
Car04g03156 336 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA1-RELATED 7 333 - -
Car04g03156 336 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Car04g03156 336 PIRSF FMO 15 332 IPR000960 GO:0050660|GO:0050661
Car04g03156 336 SUPERFAMILY FAD/NAD(P)-binding domain 17 216 IPR036188 -
Car04g03156 336 Gene3D - 16 336 IPR036188 -
Car04g03156 336 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 7 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03156 Car-Chr4 59797852 59799262 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03156 K11816 - gmx:100798781 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03156 04 59797852 59799262 Car04g03156 04 59797852 59799262 ECH