Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03153 ATGGCTACTACTCTTTCTGAAGCCTATAGAGATCACCCTCTTCACCTCCATCATATTATACCCTTAGACTTTTCTTCATTTAGAACCTTACCCGATTCCCATGCATGGCCTCAATCTAATGATGATTGTAATGATCATTTGACATCCAATATTAATGGATGCTTTGATGAATCATGCATACCCATCATTGATCTCAATGATCCTAATGCAATGGAACAAATAGGCCTTGCATGTGAGAAGTGGGGTGCTTTTCAATTGAGAAACCATGGCATACCCTTAAATTTAATTGAAGAGGTTGAAGAAGAAGCAAAGAGATTCTTTTCTCTTCCTTCCAAAGAGAAAGTTAAGGCCCTTCGATCCTCCGGCGGCGCCACCGGATATGGTAGAGCTCGAATATCACCATTCTTCCCCAAATACATGTGGCATGAAGGATTCACAATTATGGGGTCACCATCTAATGATGCCAAAAAGATCTGGCCTAATGACTATAAACGCTTTTGTGACAAAATGGAGAACTACGAAAATCAAATGAAGATGCTATCCGAGAAAGTAACAAAAATGATATTCAACATATTAGGAATTTCCCAACAAGAAAACAAATGGGTTGGTTCAAACAACCATTGTGGAGCAATTCAACTCAACTTCTACCCTTCTTGTCCTGACCCAAATAAAGCAATGGGCCTGGCCCCACACACTGACACATCACTTCTAACAATCCTTCATCAAAGCCAAACAAGTGGGCTCCAAATATTCAAAGAAGGTGTAGGATATGTTCCTGTGCACCCTCACCCTAATACATTAATTGTTCACACTGGTGACATTCTTCATATTTTGTCTAATTCAAGGTTTCGTTGTGCTCTTCATCGTGTTGTTGTCAACAATGTTAAGAATAGATATTCTGTCGCTTATTTTTATGTACCCCCAATTGATTATTTGGTTCAGCCTTTTGTTCCTACTAACTCTTTGCCACGTTTTCGTTCTTTGAGTGTTAAGGAGTATATTGGGATTAAAGCTAAGAATCTTGGGGGTGCTTTGTCTTTAATTAGTACATTTCTTGATGATGATTTATGTCAACAAGGGAAATAA 1086 0.3867 MATTLSEAYRDHPLHLHHIIPLDFSSFRTLPDSHAWPQSNDDCNDHLTSNINGCFDESCIPIIDLNDPNAMEQIGLACEKWGAFQLRNHGIPLNLIEEVEEEAKRFFSLPSKEKVKALRSSGGATGYGRARISPFFPKYMWHEGFTIMGSPSNDAKKIWPNDYKRFCDKMENYENQMKMLSEKVTKMIFNILGISQQENKWVGSNNHCGAIQLNFYPSCPDPNKAMGLAPHTDTSLLTILHQSQTSGLQIFKEGVGYVPVHPHPNTLIVHTGDILHILSNSRFRCALHRVVVNNVKNRYSVAYFYVPPIDYLVQPFVPTNSLPRFRSLSVKEYIGIKAKNLGGALSLISTFLDDDLCQQGK 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03153 361 Coils Coil 163 190 - -
Car04g03153 361 Pfam 2OG-Fe(II) oxygenase superfamily 211 305 IPR044861 -
Car04g03153 361 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 12 344 - -
Car04g03153 361 Pfam non-haem dioxygenase in morphine synthesis N-terminal 60 160 IPR026992 -
Car04g03153 361 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 204 307 IPR005123 -
Car04g03153 361 SUPERFAMILY Clavaminate synthase-like 17 341 - -
Car04g03153 361 Gene3D - 18 340 IPR027443 -
Car04g03153 361 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 12 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03153 Car-Chr4 59716283 59718697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03153 60 344 Glycosyltransferase AT5G59530 29.508 1.83e-32 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03153 K04124 - gmx:100808546 532.717