Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03148 ATGCTGAAGCAAATTTTCAACAAGCTTCCCCGGAAGTCGTCGAAAACCGATACCGACGAGTCGAATCGGGTTGACTCGCCGCGTTCTACCGACTCACCACCCGCAGCTGGTAAAAGCAACCACCGGCTGCAGGGTGGTGGTGCTTCTTTGAAACGAGCTTCGTCTTCGGCGGTGTTTCCGGCTAGCATGGTTTCTGGGATTGAACCTTTGGTGCCTTTTAAGGATGTTCCAAATGCTGAAAAGATGAACCTTTTTGTGAGCAAATTGAGTCTTTGTTGTGTGACATTTGATTTTACTGACCCTGGTAAGAACACTGCTGATAAAGATGTGAAAAGGAAAACTTTGGTTGAACTCGTTGATTTTGTGGCTTATGGGTCAATGAAGTTTAGTGAACCTGCTATTCTTGCAATGTGTAGAATGTGTGCTATTAATTTGTTTAGGGTTTTTCCACCTAATTATAGGGCTAATGGTGTTGTTGCTAGTGGTGGTGAGAATGATGATGATGAACCAATGTTTGATCCTGCTTGGTCACATTTACAACTTGTCTATGAGTTGCTGCTTAAATTTATATCTTCATCGTGCCTCGATGCTAAGGTAGCGAAAAAGTATATCGATCATTCGTTCATTTCCAAGTTGCTTGAATTGTTTGATTCTGAGGATCCTAGAGAAAGAGACTGTTTGAAAACAATTCTGCATAGGGTTTATGGGAAGTTCATGGTGCATAGACCATTTATACGGAAATCAATTAACAATATATTCTATCGGTTCGTGATTGAGACCGATAAACATAATGGGATTGCCGAGTTGTTGGAGATTTTCGGGAGCGTGATTAGTGGATTTGCTTTACCATTGAAAGAGGAACACAAAATGTTCTTGTGGAGAGTCTTGATTCCCTTGCACAAGCCTAAATCTTTGGGTGTCTACTTTCAACAATTGTCTTACTGTGTTATGCAGTTCTTAGAGAAGGAGCCTAAGTTAGCAAGCATTGTTATAAGTGGTTTGTTAAAATATTGGCCAGTAACAAATAGTCAAAAAGAGGTGATGTTTCTGGGGGAATTGGAAGAAATTTTGGAAGGAATTAACATGGTAGAGTTCCAAAGGATTATGGTTCCACTGTTTTTGCGGATCGGGTGTTGCATTAACAGCCTACACTTTCAGGTAGCTGAAAGGACCCTTTTCTTATGGAACAACGACCACATTGTAAATTTGATTGCTCATAACCGTCAAGTGATCCTGCCGATCATATTTCCAGCACTAGATAGGAACATTAAAAGCCACTGGAACCCAGCTGTTGTAAACTTAACTCATAACATCAGAAAGATGTTTGTGGAGATGGACGAGAAGCTCTTCATATCTTGTCATACTCACTTTAAGGAGGAAGAAACTATTTTAATCTTGGAAGCCGAGAAGCGAAAGGAAGCATGGAAACAACTAGAGCATGCAGCCAGTCTCAAACCTGTAATTGGAAATATTGCTGTTTTAGTGTCTCCTTTGATGACCTGA 1503 0.4072 MLKQIFNKLPRKSSKTDTDESNRVDSPRSTDSPPAAGKSNHRLQGGGASLKRASSSAVFPASMVSGIEPLVPFKDVPNAEKMNLFVSKLSLCCVTFDFTDPGKNTADKDVKRKTLVELVDFVAYGSMKFSEPAILAMCRMCAINLFRVFPPNYRANGVVASGGENDDDEPMFDPAWSHLQLVYELLLKFISSSCLDAKVAKKYIDHSFISKLLELFDSEDPRERDCLKTILHRVYGKFMVHRPFIRKSINNIFYRFVIETDKHNGIAELLEIFGSVISGFALPLKEEHKMFLWRVLIPLHKPKSLGVYFQQLSYCVMQFLEKEPKLASIVISGLLKYWPVTNSQKEVMFLGELEEILEGINMVEFQRIMVPLFLRIGCCINSLHFQVAERTLFLWNNDHIVNLIAHNRQVILPIIFPALDRNIKSHWNPAVVNLTHNIRKMFVEMDEKLFISCHTHFKEEETILILEAEKRKEAWKQLEHAASLKPVIGNIAVLVSPLMT 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03148 500 Gene3D - 77 481 IPR011989 -
Car04g03148 500 MobiDBLite consensus disorder prediction 10 26 - -
Car04g03148 500 PIRSF PP2A_B56 3 495 IPR002554 GO:0000159|GO:0007165|GO:0019888
Car04g03148 500 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 496 IPR002554 GO:0000159|GO:0007165|GO:0019888
Car04g03148 500 MobiDBLite consensus disorder prediction 1 48 - -
Car04g03148 500 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 496 - -
Car04g03148 500 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 72 482 IPR002554 GO:0000159|GO:0007165|GO:0019888
Car04g03148 500 SUPERFAMILY ARM repeat 83 478 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03148 Car-Chr4 59681910 59683917 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03148 K11584 - gmx:100781390 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03148 04 59681910 59683917 Car05g02999 05 74862057 74864185 PCT