Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03131 ATGCCTCTCGGATTTAGAGGCGAAGGAATTACTTACACAGCGCGTTTTTGTGGTGTAGAGACTCCGTTCTACTTCAACATTAAAGAAACTATTAAGACCTATATCGTTCATGGAGATTTCGATTTCGTTGTTTCTCCTCTGATGTTTTCTGGTCATTCGCCAAGCAAGGATAGAGATCCTGAAGTTCATAATCTGGATCGACGGCTCTATCCATATGCTGAAACAGACATAAACGTTGCCTGGGCTCAATGGGCCAAGGCTGGCATTGTAGTCGCAAAAATTTGTCCATGGTTAGACTTGGATTCAGAAGATGAAAATGTTAGGACGGATTCTGAAGCTATTCTGAAACAACAAATAGAATGGGCCTCTTATCTCTCTCTTAAGGCTTGCCTTCTTCCAACTCCTAAGGGAAACTCTTGTGCTAACTATGCCAGGTGTGTGAATCAGATCTTAAAGGGCCCAAAAAATAACATGCAGTTATTGCTTAGGATTCCCATTGGGATGTCTGATAACGACTATAGTCCAAGATCCAATGCTTCGGTTGATTCATGGCAAACATGGAATTCCTTCCGTGTGCTCTGTGATCATCATAATCTATTGACAATCGCCCTTGATATTAAGAGAGTCCTGCCTCCAGAGAACTCACTAAAACGCTGGTACGGGGAGCCTGTCGATGCTGCAATATTAGATACAGATATCTTTTTAACTAAGGCACGTGGTAATACTACGTACCTTCCAAAGCGTCATCAGAAATTAATTGCCGATTTGCTTGACCATAATAAACCGATCATTATATCTGGAATAAAAGTTCCTATTGATGCTCAATCCGCTGCAGGTTCAAAACGACATCCTTTACGGCCATATCTAGACCAAGTTAGTAATGTATACAAACAAAGGAACCCTCTTTCTGAGCGAGAATGTCGGGAGTTGGATATTAGAGACTTTTTACAACTACCCTTACGACCTTTCAGAAATTTTTCATCTGCTTTGAGCTATGAGGGTCAGGCGACAGATTCATTGAAATACACGGAATACGAGAGAGCAATTTGTAAAGCATTGCTAGATAGGGTTCCCAATGAAAAGGCTTCCTTCATCGTCACGGTATTGGTGGTGGTTGGTGCAGGGCGTGGGTCTCTTGTGTTTGCATCGTTAAAGGCAGCCGAAATAACTGGGCGGAAGCTAAAAGTTTATGCTGTGGAGAAGAATCCCCAAACAGTCATTGCACTTGATGAAGTAATTAAGGCAAACAACTGGGTTGATATTGTTTTCATAGTCACGAGTGACGTGCGTTACTGGAATGCCCCTGAAAGAGCTGACATATTGGTTAGTGATTTGTTAGGTTCTTTTGGGGACAATGAGCTGTCTCCTGAAAGTCTTGATGGCGCCCAGAGGTTTCTAGAGAAAGATGGAATTTCAATACCATCTTCGTACACAAGTTTCCTCCAACCATTGACAGCTTCAAAGTCATATCAAATAGCTAAGGCACGTAAATATATTTTACACTCAGAATCTGCTTGTGTTGTGAAACTATACAATGTGGCCCGGCTTGCGCCATCTCAACAGGTTTTTACCTTTACTCATCCAAAATGGTTTGATAAAGAAAGCAACGAACGGTATAAGAAGTTGCAGTTTGAGATACCTAAAGACACTGGGTCAGCAATGGTTCACGGATTTGCTGGCTATTTTAATATGACTCTTTATAAGGATGTGTGTCTTGCAACTGAACCTTCAACTAAGAAGCCAGATTTGTTCTCTTGGTTTCCCATGTTTTTCCCATTAAGGATGCCAATTCGTGTGGATCGTGGCTCTATTCTTGAAGTTCATTTCTGGCGCTGTGTTGATTCTAGAAAGGTTTGGTATGAGTGGTGTGTTACATCTCCTTCTTCATCTCCAATTCACAATTGTAATGGCCGCTCTTGTTGGATGGATCTTTAA 1935 0.416 MPLGFRGEGITYTARFCGVETPFYFNIKETIKTYIVHGDFDFVVSPLMFSGHSPSKDRDPEVHNLDRRLYPYAETDINVAWAQWAKAGIVVAKICPWLDLDSEDENVRTDSEAILKQQIEWASYLSLKACLLPTPKGNSCANYARCVNQILKGPKNNMQLLLRIPIGMSDNDYSPRSNASVDSWQTWNSFRVLCDHHNLLTIALDIKRVLPPENSLKRWYGEPVDAAILDTDIFLTKARGNTTYLPKRHQKLIADLLDHNKPIIISGIKVPIDAQSAAGSKRHPLRPYLDQVSNVYKQRNPLSERECRELDIRDFLQLPLRPFRNFSSALSYEGQATDSLKYTEYERAICKALLDRVPNEKASFIVTVLVVVGAGRGSLVFASLKAAEITGRKLKVYAVEKNPQTVIALDEVIKANNWVDIVFIVTSDVRYWNAPERADILVSDLLGSFGDNELSPESLDGAQRFLEKDGISIPSSYTSFLQPLTASKSYQIAKARKYILHSESACVVKLYNVARLAPSQQVFTFTHPKWFDKESNERYKKLQFEIPKDTGSAMVHGFAGYFNMTLYKDVCLATEPSTKKPDLFSWFPMFFPLRMPIRVDRGSILEVHFWRCVDSRKVWYEWCVTSPSSSPIHNCNGRSCWMDL 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03131 644 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 5 1 644 IPR025799 GO:0016274|GO:0018216
Car04g03131 644 Pfam PRMT5 arginine-N-methyltransferase 309 473 IPR035075 -
Car04g03131 644 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 347 643 IPR029063 -
Car04g03131 644 Gene3D - 476 644 - -
Car04g03131 644 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1 644 - -
Car04g03131 644 Gene3D - 8 307 - -
Car04g03131 644 Gene3D Vaccinia Virus protein VP39 309 475 IPR029063 -
Car04g03131 644 Pfam PRMT5 oligomerisation domain 476 642 IPR035248 -
Car04g03131 644 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 316 622 IPR025799 GO:0016274|GO:0018216
Car04g03131 644 Pfam PRMT5 TIM barrel domain 39 297 IPR035247 -
Car04g03131 644 PIRSF PRMT5 3 644 IPR007857 GO:0006479|GO:0008168|GO:0035246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03131 Car-Chr4 59443111 59457747 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03131 K02516 - gmx:100815240 750.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03131 04 59443111 59457747 Car04g03131 04 59443111 59457747 ECH