Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03126 ATGGCAACGGTTTTGAAACTGTTATCATCAGTATCACTAGCAATAGCATCGAAACCTAAAAAACTGATTCATCACACCAATTCTTTTTCAAATCTTAGAACCGTTAGCAGCAACGCCATGAGAATGCCAAAGAAGACAGAAGCAGCGCTTGCGAAGGAAAAGAGAAGAACGCGTTCGGATAGAGAACTCGATAAGGATACAATAATTGAACTTTACAATAACAATTCTCATCTTCATATTCCTGTCATGCTTCCTCAAGTTTTGGATGTCTTCTCAAATTTCGAGTTAACCTCTTTCGTCGATTGTACCCTTGGTGCTGCTGGCCACTCCACCAATGTGATTAGAGGTCATCCTGAATTGAAGTATTTTGTTGGGATGGATGTGGACCCTGTTGCACATGACTCGGCTCAATCCCGCATCAGTTCCGTTTTGGACGATAATGCGTCTAATTTGAAAGTGTTTACTGTGTTAAGAAATTTTAGATACATCAAATCTGTGCTTAGAGAAACAGGCGAGAAACACTTAGGGACTGAGTCTGTTGATGGCATCTTGATGGACTTGGGAATGTCATCTATGCAGGTGGACGATCCTCAAAGAGGATTCAGTGTGCTTGGTGATGGACCCCTTGATATGCGTATGGATCCTCAGGCAAGCCTTAAAGCAGAAGACATATTAAATTCTTGGCCAGATGATGACGTGGGCCGTATCCTAAGGGATTATGGGGAAGAAAGTAATTGGCGTACTCTTCAAAAGAAAATTATACAAGCCCGTTTACAAGGTGGATTACATTCCACTAGCGACTTGCTGGATCTTATTCGGCGTGTGACTCCTGCAATGAAAGGTGGAAGGCAAGGTTGGATAAAGACAGCAACCCGGGTATTTCAAGCATTGAGAATCGCGGTCAATGATGAACTGAAGACTCTCGAGGATTCTCTCTATTCATGTTATGACTGCCTTGCACCTGGGGGCAGGCTTGCTGTCATATCCTTTCACAGTTTGGAAGACAGAATTGTGAAGCAAACTTTTCTTAATATAATTAAAGGGAATGAAGACATGGAAGATAGTGATATGAGGAAAATGATTGATGAAATCAAAGAAAAAGAAGCATGGATAAGACAAGTATTACATGGATCAAATGGAATAATTCTCACAAAAAGACCAATCACGCCGTCAGAAGAAGAAGAGACATTGAACCGCAGAAGTAGAAGTGCAAAGCTCAGGGTTATTCAGAAGATTTGA 1239 0.414 MATVLKLLSSVSLAIASKPKKLIHHTNSFSNLRTVSSNAMRMPKKTEAALAKEKRRTRSDRELDKDTIIELYNNNSHLHIPVMLPQVLDVFSNFELTSFVDCTLGAAGHSTNVIRGHPELKYFVGMDVDPVAHDSAQSRISSVLDDNASNLKVFTVLRNFRYIKSVLRETGEKHLGTESVDGILMDLGMSSMQVDDPQRGFSVLGDGPLDMRMDPQASLKAEDILNSWPDDDVGRILRDYGEESNWRTLQKKIIQARLQGGLHSTSDLLDLIRRVTPAMKGGRQGWIKTATRVFQALRIAVNDELKTLEDSLYSCYDCLAPGGRLAVISFHSLEDRIVKQTFLNIIKGNEDMEDSDMRKMIDEIKEKEAWIRQVLHGSNGIILTKRPITPSEEEETLNRRSRSAKLRVIQKI 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03126 412 SUPERFAMILY Putative methyltransferase TM0872, insert domain 199 302 IPR023397 GO:0008168
Car04g03126 412 TIGRFAM TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 75 411 IPR002903 GO:0008168
Car04g03126 412 PANTHER S-ADENOSYL-METHYLTRANSFERASE MRAW 55 412 IPR002903 GO:0008168
Car04g03126 412 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 79 412 IPR029063 -
Car04g03126 412 Gene3D Vaccinia Virus protein VP39 79 409 IPR029063 -
Car04g03126 412 Pfam MraW methylase family 78 412 IPR002903 GO:0008168
Car04g03126 412 Gene3D Putative methyltransferase TM0872, insert domain 197 304 IPR023397 GO:0008168
Car04g03126 412 Hamap Ribosomal RNA small subunit methyltransferase H [rsmH]. 79 412 IPR002903 GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03126 K03438 - gmx:100803819 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03126 04 59366006 59368691 Car04g03126 04 59366006 59368691 ECH