Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03121 ATGAGCGCCACCACATTCCACGTTTGTACCGGTTTCAATTTAAGCGCTTCCAACCATGTTCATGTTAAAGCTACCAAATGCAACTTCGCGGGTCAATCGTCGGTGAAAGCACTTCCTATTCGTATATTATCCGTCGGAAAAAAGCGATCAAGTGGACTGCAACTCATGGTTGACGAGTATGTTGAAAAGATCAAGTACTATTCTAGTGTCGAGGATGTTCAAATTCGGCCAAATCCCAGAAATGCTCGTGACCAAAGGGCTCAGGTTGATGACGAAGACACGGCAATGATGAATCTTATAAGGTCTGATGATTGGGTTGTGATGTTGGACGAACGAGGGCAAGATGTACGATCTGAGCAAATGGCAGAGTTAGTGGCGCATGCAGGAAATACTGGTGCTTCACGTTTATCTTTTTGTATCGGTGGACCCTATGGTCATGGAAAAAAAATAAGGGAACGTGCTAACTTATCAATCAAGTTATCTTCAATGGTCTTAAATCATCAGATAGCATTACTTGTTCTTGTGGAACAGCTTTACAGGTCATGGACAATTTTGAGGGGACAAAAGTACCATCATTAG 579 0.4266 MSATTFHVCTGFNLSASNHVHVKATKCNFAGQSSVKALPIRILSVGKKRSSGLQLMVDEYVEKIKYYSSVEDVQIRPNPRNARDQRAQVDDEDTAMMNLIRSDDWVVMLDERGQDVRSEQMAELVAHAGNTGASRLSFCIGGPYGHGKKIRERANLSIKLSSMVLNHQIALLVLVEQLYRSWTILRGQKYHH 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03121 192 PANTHER METHYLTRANSFERASE 16 192 IPR003742 GO:0006364|GO:0008168
Car04g03121 192 CDD RlmH-like 40 192 IPR003742 GO:0006364|GO:0008168
Car04g03121 192 Pfam Predicted SPOUT methyltransferase 40 191 IPR003742 GO:0006364|GO:0008168
Car04g03121 192 SFLD SPOUT Methyltransferase 18 192 - -
Car04g03121 192 Gene3D - 37 192 IPR029026 -
Car04g03121 192 SUPERFAMILY alpha/beta knot 39 190 IPR029028 -
Car04g03121 192 Hamap Ribosomal RNA large subunit methyltransferase H [rlmH]. 38 192 IPR003742 GO:0006364|GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03121 K00783 - gmx:100796609 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03121 04 59322595 59328367 Car04g03121 04 59322595 59328367 ECH