Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03117 ATGGGTTTCAAAAGCTCTTCTCTTCTATGCTTGGCACTTCTCCTTGCAGTCTCTTCTTCCATTCATGCATTTGACATCACAAAACTGCTAGGTCAAAATCCAGATTTTGCCACCTTCAACAAATACCTCACCGAAACCAAGCTTGCTGAGCCAATCAACAGCCGCAACACCATCACCATCCTCGCCGTTAGCGATGCCGGTCTTTCTTCCCTTTCCGGGAAATCTCAACAATTCATCAAGGCCTCACTAAGCACCCACGTGATCCTCGACTTCTTCGATGAGAAGAAGCTTATGGAGGCTCAGGGAAGTGGTCAACTCTTGACTACTCTTTACCAATCCTCAGGTCTCGCCATGAACCAACAAGGGTTCATTAAGGTTGCCCTTATTGGTGAAGGCGAGATCGCTTTTGGCTCCGCTGTTAACGGTGCTCCTCTTGATGTTTCCCTTGTAAAGACCGTTGTCTCCCAACCCTACAACATTTCCATACTCCAAGTCACAAAACTTATTGTGGTTCCTGGACTTGATGCACAAACCCCAGCCTCATCAGGTAATGCACAAGCCCCCGCTGCAGCAAAAACTCCAGCGGAGGGTGCAAAGTCACCAGTACCTGCACAAAATGCTAAGGCTCCAGTAGCATCAGCCAAGGCTCCTGTGCCGGCTCAAGGAGCTAAGGCCCCAGCTCCGGCACAAAAGGCCAATGCTGATGCTCCTACTAGCGGAGCACAAAGCCCTTCTTCGGAGGAAGTGACTGCTCCTTCACCTTCTGATGTGAGCGCCACAGACTCCCCTGCTGAAGCACCAACAACCACTGAATCAAGCCCATCTTTGGCACCTGGTCCTGCAGATGATGAGACTGCTGCAGATGCTTCAACTTCTAGCAGCTCTTCAAGGATTATGGTAGGTTTGGTTGGAAGTGTGATGTGCTTCGCTTCTCTCTTGGCCGTTATGTAG 951 0.5005 MGFKSSSLLCLALLLAVSSSIHAFDITKLLGQNPDFATFNKYLTETKLAEPINSRNTITILAVSDAGLSSLSGKSQQFIKASLSTHVILDFFDEKKLMEAQGSGQLLTTLYQSSGLAMNQQGFIKVALIGEGEIAFGSAVNGAPLDVSLVKTVVSQPYNISILQVTKLIVVPGLDAQTPASSGNAQAPAAAKTPAEGAKSPVPAQNAKAPVASAKAPVPAQGAKAPAPAQKANADAPTSGAQSPSSEEVTAPSPSDVSATDSPAEAPTTTESSPSLAPGPADDETAADASTSSSSSRIMVGLVGSVMCFASLLAVM 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03117 316 Gene3D FAS1 domain 23 169 IPR036378 -
Car04g03117 316 ProSiteProfiles FAS1/BIgH3 domain profile. 23 154 IPR000782 -
Car04g03117 316 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 315 IPR033254 -
Car04g03117 316 MobiDBLite consensus disorder prediction 178 295 - -
Car04g03117 316 SUPERFAMILY FAS1 domain 30 172 IPR036378 -
Car04g03117 316 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 1 315 - -
Car04g03117 316 MobiDBLite consensus disorder prediction 235 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03117 Car-Chr4 59288529 59289813 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03117 - - gmx:100798739 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03117 04 59288529 59289813 Car04g03117 04 59288529 59289813 ECH