Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03101 ATGCAACCTCAGCAGAGCTCAAGAATCAATTTGGGTGAGTTGAAAGTACTGATTGTAAAGAAGATTGGACCGGATAAGTCAAAGCGGTACTTTTATTACCTAAATAGGTTTTTGAGTCAGAAATTGAGTAAGAATGAGTTTGATAAGTTATGTTTTCGGGTATTCGGGAGGGAGAATCTTCCGTTGCACAACCTTTTTATCAGGTCGATTTTGAAGAATGCCTGCCAAGCCAAGACTCCACCAATAGTCCAGCCATCGGGTCCTTCGAAACTGGGGGCACGTGTTACTAATTTATCACCCGGTAGGGAAGATGGTCATGAACGGAGTGTTGCTAATGCTAACTTCCAAAATCATAATATTTCTGTTTGGTCAAATGGGGTTTTGCCGGTGTCCCCGCGTAAGTTACGGTCTGGAATGCGTGATCGGAAGCCTAAAGATAGACCAAGTCCCCTAGGACCGAATGGGAAAGTTGATTCTGTTGCTCATCAATCCACGGCTACAGAAGACAGTGGTATTAAGGAGAATGGAACTTTTACTCCATGTGATTATCAGCGACCAATACAACATCTTCAATCAGTTGCTGAGCTACCTAAGAATGTAGGGGATGCTATGCTAGGACTAGGAGAAAAACCAAGAACACATGTCAACGGGTTGACAGAAATATCAACTGTGGAAGATGGAGAGGAGGTGGAGCAATTTAATCGCCTCAATTTTGCCAGAAGTCCTCTGATAGCACCACTTGGAATTCCTTATTGCCCTGCAAGTTTAGGTGGGGCCCGCAAAACATTGCCTGTGAATAGCACGGCCGATTTTGTTGGTTGTTGTGACAGTGGTAGGTTATCCGATACAGATATGTTGAGAAGGCGCATGGAGCAGATTGCAATGGTACAGGGTCTTGGAGGTGTTTCTATGGAATGTGCAAGTATGTTGAATAATGTGTTGGATGTATACTTGAAACGGTTGATCAAGTCTTGTTTCGATATAGCGGGAGCTAGGTCTGCAAATGCACCGACAAAGCTCCCTAACTCAAAGCAGCAGATTCATGGGAAGATCATTAATGGCATGTTGTCAAATAATCATTCACATATGCATAGTACTGGTAGGTTGGCAGAATCTGAGCCTGAACACAGACACGAGTTCTCTGTATCTTTGCATGATTTTAAAGTTGCAATGGAGCTAAATCCACAGCAACTTGGAGAAGATTGGCCAATACACTTGGAGAAAATTTCTATGCAATCGTTTGAGGAATAA 1251 0.4309 MQPQQSSRINLGELKVLIVKKIGPDKSKRYFYYLNRFLSQKLSKNEFDKLCFRVFGRENLPLHNLFIRSILKNACQAKTPPIVQPSGPSKLGARVTNLSPGREDGHERSVANANFQNHNISVWSNGVLPVSPRKLRSGMRDRKPKDRPSPLGPNGKVDSVAHQSTATEDSGIKENGTFTPCDYQRPIQHLQSVAELPKNVGDAMLGLGEKPRTHVNGLTEISTVEDGEEVEQFNRLNFARSPLIAPLGIPYCPASLGGARKTLPVNSTADFVGCCDSGRLSDTDMLRRRMEQIAMVQGLGGVSMECASMLNNVLDVYLKRLIKSCFDIAGARSANAPTKLPNSKQQIHGKIINGMLSNNHSHMHSTGRLAESEPEHRHEFSVSLHDFKVAMELNPQQLGEDWPIHLEKISMQSFEE 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03101 416 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 4 328 IPR024738 GO:0070461
Car04g03101 416 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 1 416 - -
Car04g03101 416 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 416 IPR024738 GO:0070461
Car04g03101 416 MobiDBLite consensus disorder prediction 135 149 - -
Car04g03101 416 MobiDBLite consensus disorder prediction 158 174 - -
Car04g03101 416 MobiDBLite consensus disorder prediction 131 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03101 Car-Chr4 59143297 59144547 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03101 - - gmx:100803746 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03101 04 59143297 59144547 Car04g03101 04 59143297 59144547 ECH