Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03082 ATGAGGATCGAACAAGAAAGTGATGGAGTTTCAGCTTCCACAAAACATCTTGTTTTTGCTTATTACGTTACTGGTCATGGTTTTGGTCATGCCACCAGAGTCACTGAGGTGGTGAGGCATTTGATTGATGCGGGGCATGATGTGCATGTTGTCACTGGTGCTCCTGATTTTGTTTTCACCTCTGAAATTGAGTCTCCTCGATTATTCATTCGCAAGGTGCTTTTGGACTGTGGAGCTGTTCAAGCAGATGCTTTGACGGTTGATCGCCTTGCTTCTTTGGAGAAGTATTCTGAAACAGCGGTGAAGCCGCGAGCTAAAATCTTGGCTTTAGAAACCGAGTGGCTCAACTCTATAAAAGCTGACTTAGTGGTTTCTGATGTTGTTCCGGTTGCATGTCGTGCGGCAGCAGATGCTGGCATTCGCTCTGTCTGTGTGACCAATTTCAGTTGGGACTTCATCTATGCAGAGTATGTCATGGCTGCTGGACTTCATCATCGTTCAATAGTTTGGCAGATAGCCGAGGACTATTCCCATTGCGAGTTCCTTATTCGCCTCCCCGGATATTGCCCAATGCCTGCATTTCGCGATGTTATTGATGTCCCTTTGGTGGTGAGGAGGCTGCACAAATCTGCAAAAGAGGTGAGGAAGGAGCTCGAGATACCTGATGATGTGAAGCTAGTTATTCTCAACTTCGGCGGGCAGCCATCGGGATGGAAGTTAAAGGAGGATTTCTTACCTTCTGGCTGGTTGTGCCTGgtttgtggtgcttctgaaaatgaggaccttccaccaaattttagaagacttgctagagatgcatatacgcccgacATTATTGCAGCATGTGACTGTATGCTTGGaaaaattggctatggaacagttagtgaagccttggcatacaagtgtccatttgtctttgtacgcagagattatttcaacgaagaaccttttttgagaaatatgcttgagtattatcaatgtggtgtcgaaatgatcaggagggatttaatcaccggtcactggagaccttatctcgaacgtgcaataagtctgaaaccctgctatgaagcaggcattaatggtggtgagGTGGCAGCCCACATCCTTCAGGAAACGGCTTTTGGAAAAAATTATGCATCAGATAAGCTTAGTGGGGCAAGAAGATTGCGTGATGCAATAGTTCTTGGTTATCAACTCCAAAGGGCCCCTGGCCGAGATATTACGATCCCAGAATGGTATGCTACAGCTGAAGAGCAACTCGGCCACTCATCACCTAGTTCACCTGTGAATAATGGTGACTTTGCATTCCATTCAGGCGTTGAAGATTTTGATATTCTTCATGGAGATTTTCAAGGTCTTCCAGATACTGTGGCGTTCTTACAAAGCCTATCTGAATTGGTCGCGAAGCACACAAAGCGGGAGCGCAAGGCTGCAGCAAATCTCTTCAATTGGGAGGAAGAAATTTTTATAACAAGAGCTCCAGGAAGATTAGATGTAATGGGCGGTATTGCTGATTATTCTGGAAGTCTTGTCCTGCAGATGCCAATTAAAGAAGCCTGTCATGTTGCTTTGCAAAGAGTCCATCCAAGTAAGCATAGACTGTGGAAACATGCAGAGGCCAGACAGAATGACAAAGGCGGGGATCCAACTGCTGTCTTGCAAATTGTATCATACGGCTCAGAGTTAGGCAATCGTGGCCCAACATTCGACATGGATTTGTCTGATTTTATGGATGGAGACAAGCCAATTTCATATAAAAAAGCAAGGAAATACTTTGCTCAAGATCCATCTCAAAAGTGGGCAGCATATGTTGCGGGTGCAATTTTGGTGTTAATGACCGAATTGGGCGTGCAATTTGAAGATAGTATCAGCATGCTGGTTTCATCTGCGGTCCCAGAAGGGAAAGGTGTATCGTCTTCTGCATCTGTGGAGGTCGCTAGTATGGCTGCTATTGCAGCTGCTCATGGATTAAATATAAGCTCAAGGGATCTGGCTTTGCTCTGCCAGAAGGTGGAAAATCACATTGTAGGTGCTCCATGTGGTGTCATGGACCAGATGGCTTCAGCGTGCGGTGAAGCCAACAAGCTTCTTGCCATGATTTGTCAGCCTGCAGAGATTGTTGGCCTCGTCGAAATTCCAAGCCATATCCGAGTTTGGGGAATTGATTCTGGAATTAGACACAGCGTTGGAGGTGCAGATTATGGATCTGTGAGAATTGGAACCTTTATGGGTATGAAAATGATAAAGTCTAGGGCTTCTGAGGAATTGACTGAGATGTGTGCTGCAAATGGATTGAACTATGATGAAGTGGAACAAGGTGACATAGAATTACTTAAACAAGAAGCTTCCTTAGATTACTTATGTAATTTACCACCTCACAGATTTGAGGCTCTTTACGCTAAGACGATACCCGAGTCCATTGCTGGCGAGACATTTTTGGAGGAATATACAAATCATAACGATCCTGTCACTATTATTGATGAAAAGCATAACTATGGAGTGAGAGCTCCCACACTACATCCTATCTATGAAAATTTCCGAGTCAAGACCTTCAAAGCACTTCTGACATCGACATCTTCAACTGATCAACTTTCAGCTTTAGGAGAATTGCTATATCAGTGTCACTACAGCTACAGTGCTTGTGGACTTGGGTCTGATGGAACAGACAGGCTTGTTCACTTGGTACAAGAATTGCAGCATAGCGCAGCGTCTAAATCCGAAGGCGGAACTTTATGCGGAGCCAAGATCACTGGTGGGGGTTCCGGTGGAACGGTTTGTGTAATCGGTAGAAATTGTCTCAAGAGCAGTGAACACATTTTTGAGATTCAGCAGAGGTACAAAAAAGCTACTGGCTACTTGCCCTTTATTTTCGAAGGCTCGTCACCGGGTGCAGGAAAGTTCGGTTACCTGAAAATTCGCCGACGGGCTACCCCGAAAAAAGTCGACAGTTTCAAGGATGTTAATGAAGTGTTGGTGGAGAATGAAAGCTGA 2991 0.4059 MRIEQESDGVSASTKHLVFAYYVTGHGFGHATRVTEVVRHLIDAGHDVHVVTGAPDFVFTSEIESPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVKPRAKILALETEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGLHHRSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLHKSAKEVRKELEIPDDVKLVILNFGGQPSGWKLKEDFLPSGWLCLVCGASENEDLPPNFRRLARDAYTPDIIAACDCMLGKIGYGTVSEALAYKCPFVFVRRDYFNEEPFLRNMLEYYQCGVEMIRRDLITGHWRPYLERAISLKPCYEAGINGGEVAAHILQETAFGKNYASDKLSGARRLRDAIVLGYQLQRAPGRDITIPEWYATAEEQLGHSSPSSPVNNGDFAFHSGVEDFDILHGDFQGLPDTVAFLQSLSELVAKHTKRERKAAANLFNWEEEIFITRAPGRLDVMGGIADYSGSLVLQMPIKEACHVALQRVHPSKHRLWKHAEARQNDKGGDPTAVLQIVSYGSELGNRGPTFDMDLSDFMDGDKPISYKKARKYFAQDPSQKWAAYVAGAILVLMTELGVQFEDSISMLVSSAVPEGKGVSSSASVEVASMAAIAAAHGLNISSRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMICQPAEIVGLVEIPSHIRVWGIDSGIRHSVGGADYGSVRIGTFMGMKMIKSRASEELTEMCAANGLNYDEVEQGDIELLKQEASLDYLCNLPPHRFEALYAKTIPESIAGETFLEEYTNHNDPVTIIDEKHNYGVRAPTLHPIYENFRVKTFKALLTSTSSTDQLSALGELLYQCHYSYSACGLGSDGTDRLVHLVQELQHSAASKSEGGTLCGAKITGGGSGGTVCVIGRNCLKSSEHIFEIQQRYKKATGYLPFIFEGSSPGAGKFGYLKIRRRATPKKVDSFKDVNEVLVENES 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03082 996 Pfam GHMP kinases C terminal 863 936 IPR013750 -
Car04g03082 996 SUPERFAMILY Ribosomal protein S5 domain 2-like 480 705 IPR020568 -
Car04g03082 996 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 23 338 - -
Car04g03082 996 Gene3D - 823 951 IPR036554 -
Car04g03082 996 Gene3D - 465 718 IPR014721 -
Car04g03082 996 PANTHER L-ARABINOKINASE 17 973 - -
Car04g03082 996 SUPERFAMILY GHMP Kinase, C-terminal domain 717 966 IPR036554 -
Car04g03082 996 PIRSF Gal_kin_glcsltr 1 978 IPR012369 -
Car04g03082 996 Pfam GHMP kinases N terminal domain 626 691 IPR006204 GO:0005524
Car04g03082 996 Gene3D Glycogen Phosphorylase B; 207 350 - -
Car04g03082 996 Gene3D Glycogen Phosphorylase B; 13 169 - -
Car04g03082 996 PRINTS Mevalonate kinase family signature 493 517 - -
Car04g03082 996 PRINTS Mevalonate kinase family signature 629 651 - -
Car04g03082 996 PRINTS Mevalonate kinase family signature 672 691 - -
Car04g03082 996 PRINTS Mevalonate kinase family signature 913 930 - -
Car04g03082 996 PANTHER MEVALONATE KINASE/GALACTOKINASE 17 973 - -
Car04g03082 996 Pfam Galactokinase galactose-binding signature 482 525 IPR019539 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03082 K12446 - gmx:100787860 1773.44