Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03070 ATGTCTCCTCCTCGCAATCGCCTCCACCAGTTTTATGCTACCAAGAAGAGGAAAGCGGTTTCACCTGTTTCTAAGAGAATTGAGAAAGGTGCAAGGCTTGTTGTGCTTGATGGTTCTCCAAGTGCTAAAGGCTCATTGGAAACTTACTTGGTTCCGTCGCAGGGTGACGAGTCGGTGAGACCGGATTCGGTTAGGAGAAATTTGGCGTCGGAGATTGGTAGTTATGTTGATAAGCAGCCTGTTGAATCAATTCAAGGGGTTCGAGATTCTCCGAATACTCGGATAAGGATTGAAAATGAAATGCTTTTGGTTGATGATCCTGTTCAGGTAAACAACTTGAGTGATTTTGGACAAGGGGGTGAAAAATCAGAGCTCAAACAATTTAAAGCTGATTTTTTGTCTCTCTATTGCAGTGAATTGCGCTCGGGCATTAGTTCACCAATGGAGACCAGATTGAAAGGCCACCAGAGAAATGAGTCTCTGACATCAGTAGGGGAAAATAGTAGTATACTGCAGAAGTGTAACGACACTAGTGAGCCACATTTTGTTTGTGAAAACATTTCGAGCGGCAAGATATATGTAGACATCAAGTCTGGTGGTGTTCGAAATACTATGGAAAGTGTTCCAGGCCGCTCTGCAAAGGTGTCTGATGGTGGTGATACTAATGCCTTCGACACGAGCTTCAGAAAATGTAGTTATACACCTATGTCTATGAATATGGCTGAGTGCCATACACCAGGATCTTTGATTGTTAAAGCATGCGTTAAGGGGACTACTCCAAAGTCAACACGCGGAAGCTCGATGTTTTCGCCTGGAGAGGCTTTTTGGGATGAAGCAATTCAACTTGCTGATGGTTTGGCTGTTCCCATGGGTAATGATTCTTCTAAAGTTATAGAAGAAAGTAATGCGGTGGGAGACCAAGTTGAGATGAAGAACTCATGTAATTTACAAAATTACGACGGCAAGGCAAGGAAAATATTGGATCAAAGTAAAAACACAGGGTTGGCTGAGATGCACACAAAAGATTCTACGAAAGAAGCTTCCAGCCTTCCTGTTAAGCATTTTGATTTTTCGTATGAGGACAATAATATGGGTGAAAATACCCTTCAAAATTGTCGCGTGAATAATCTGGTCAATGTTACTTGTGGGGCTGGAAAGCCGTATGAGTCTACTTCTGTGGCAAGTCATACATATGAACAGACAAATGAAATGCAGGAGAAAGTTTTGGTAGATGAATTAGGCAAACGAGTGAAAAAGAATAATTTCAGTATGACACATAATAATTTTGATTCACCCAACAATGAGGCCAGGACATCAATTAGTACACATGCATCTCTTGAAGCCACAACGCCTTCAAGTCGTGTGTCACTTGATAATCATTTAGACCTACATATCTGGCTTCCACCTGAAATATGCAGCATATATAGAAAGAAAGGAATTTCAAAGCTTTACAATTGGCAGGTTGATTGCCTTCGGGTCAACGGTGTCCTACAAAGAAGAAATCTTGTATATTGTGCTTCTACAAGTGCTGGAAAGAGTTTTGTTGCTGAGATTTTAATGTTGCGGAGGGTGATAACAACTGGAAAAATGGCAATACTTGTTCTTCCATATGTATCAATTTGTGCAGAAAAGGCAGAACATCTTGAAAAGCTTCTTGAGCCACTTGGTAAACATGTTCGTAGTTATTATGGGAACCAAGGTGGTGGAACACTTCCTAAAGATACTTCTGTAGCTGTCTGCACAATAGAAAAGGCAAACTCACTAATTAATAGATTATTGGAAGAGGGCCGTCTGTCAGAATTGGGAATCATTGTGATAGATGAACTTCATATGGTTGGTGATCCACGAAGAGGTTATCTTCTAGAACTTATGTTGACAAAGCTACGTTATGCAGCAGGGGAGGGCATTTCAAAATCAAGCGATGGAGAGAGTTCAGGTGGAAGCAGTGATAAGACCGATCCTGCTCAAGGTCTGCAAATTGTTGGAATGAGTGCGACAATGCCAAACGTTGCAGCAGTTGCTGACTGGCTTCAAGCAGCACTATACCAGACAGAGTTCCGGCCAGTTCCTTTAGAAGAATATATTAAAGTTGGTAGTTCCATTTATAACAAGAGTATGGAACTTTCTAGAACAATTCGAAAAGGAGCTGACCTTGGTGGTAAAGATCCAGATCATGTTGTTGAACTATGTAACGAGGTTGTTCAAGAGGGACACTCAGTTTTAATATTTTGTTCTAGCCGTAAGGGTTGCGAATCAACTGCAAGACACGTTGCAAAGTTCCTTAAAAGCTTTACTGTCGATATTAATGAGAATAATTGTGAGTTTGCTGATATTACTTCTGCTATTAACTCATTGAGAAAGTGCCCAGCTGGGTTGGACCCTGTATTAGAAGAAACTTTTCCAGCAGGTGTTGCATATCACCATGCCGGCCTTACGGTTGAGGAACGAGAGATTGTTGAAACTTGTTACCGGAAAGGCCTTTTACGTGTCTTAACTGCCACATCAACATTAGCAGCCGGAGTTAATCTACCAGCTAGGAGAGTAATTTTCCGCCAACCTAGAATTGGTTGTGATTTTATTGATGGGACGAGGTACATGCAGATGGCTGGTCGTGCTGGTCGAACTGGAATCGATACAAAAGGAGAAAGTGTACTCATCTGCAAACCAGAAGAGTTAAAAAAAGTTATGGGACTTTTAAATGATAGTTGTCCGCCATTACATTCTTGTTTATCAGAAGATTTAAATGGAATGACTCACGCAATTTTAGAAGTGGTTTCTGGAGGAATAGTTCAAACTGCTAATGACATTAACCGGTATGTTAGATGCACTCTTTTGAACTCCACAAAACCATTTCTGGAAGTTGTGAAATCTGCTCAAGAATCCCTAAGATGGTTGTGCCAAAGAAAATTTCTTGAATGGAATGAAGACACTAAACTCTACAGTACCACACCTCTTGGACGTGCAGCTTTTGGCAGTTCTCTCTGTCCGGAAGAATCACTTATTGTGTTAGCTGATCTTTCAAGAGCAAGGGAAGGATTTGTTCTTGCATCTGACTTGCATTTGGTTTACTTGGTGACGCCAATCAATGTTGATGTTGAGCCAGATTGGGAATTGTACTATGAGCGTTTTGTGAAATTGTCTCCTCTTGATCAGTCCGTTGGCAATCGAGTAGGTGTGACAGAACCATTCTTGATGCGTATGGCACATGGTGGACCGATGCGTTATTCAAGCAAGTCAAGAGATAGTACAAGATGGTTGCATAACAAACAGCGAAATCAACATGGAATCTCCGGGGGAACTGTTAACTCAGATGATCAAACACTTCGTGTCTGTAGAAGATTCTATGTTGCTCTCATTTTATCGCTTTTAGTACAGGAAACTCCTGTGGGTGAGGTTTGTGAAGCATTTAAAGTTGCTAGAGGAATGGTTCAAGCTTTGCAAGAAAACGCTGGTAGGTTTGCATCTATGGTTGCTGTGTTCTGTGAGAGGCTGGGGTGGAACGACCTTGAAGGCTTAGTCGCCAAGTTTCAAAATCGTGTATCATTTGGAGTTAGAGCAGAAGTTGTTGAGCTTACCAACATTCCTTTTGTTAAAGGCTCTCGAGCCAGAGCACTTTATAAAGCTGGTTTACGGACACCTCTTGCAATTGCTGAAGCATCGATTCCTGAAATAGTAAAAGCACTTTTTGAATCTTCATCGTGGGCCACAGAAGGTTCTGCACAAAGGAGCTTACAATTCAGTGTAGCAAAGAAGATAAAGAATGGTGCTCGCAGGATTGTTCTTGATAAAGCTGAAGAAGCAAGGATTGCTGCTTTCTCAGCCTTTAAGTCACTTGGATACAATGTCCCACAGTTAGCTCCACCCATATCCACTGCTGCACGCGATTTTATCAGGAAAGAAGCTGGGAGCTCCTCTGGAAGTGACACAGCTGACACTAGTCATAGCTTTGTTGATGCAAATCACACTGATAATTCTAAGATAGTCGCTTTAGAAAAAGAAAAGGATTTGATTAAATCATCTGACAATGGTGCTCTGTCTTCTGTAGAAGGAAAATCAGACAGTGCAATGCCATGTATCTTTTCTACTGTTCCAGCTGTAGTACCTACTACAAATGAGCTCAGTACAACTTTTGGCCCTGTCAAAATTCCTGATGTTACCACCCTGTCTCTTCAGTCACAGAAACAAAATGATAAATCCAGTATACATGGTGGATGCCATGCTCATGGTTCAGGGGAACAAGATCATAAGGAGAATGTGGCTAGTGGTAACATGGATAGTTCCAGCGGGAAAGGGCCCATTAATGCAGTTAGTAGTCCTGGTGGGCTTGATTCATTTTTGGATCTATGGGATACAATACCAGAGTTCTACTTTGATATCCATTACATCAAACGATTGGAATTGCACTCTGCTGCTCCTTTTGAAGTACACGGTATTGCCATCTGTTGGGAAAACTCTCCCATGTATTACATTAATCTTCCTAGGGATATTCTGCTGTCGTACAATAGAAAAGATGATGGTTTTTCCCTGAGTGCATGCAGTAATAAGCAGAAAGTTCCATCATCTAATACTAAGCAAGATTTGATTAATGCCATGAATAGATGGAGCAGGATTAGCAAAATAATAGGTAAAAAAAATGTAAGAAAGTTCACCTGGAATTTGAAGATTCAGATTCAGGTGCTAAAAAAGCCTTCAGTTTCGGTTCAGAGATTTGGTTCGTTGGACACACTTGATAAAAATATGGACCTTGAAATTGTAGACAGTTCTTATGTGTTGTTGCCCCCAATCCATGTTAAAGCCGCAATTGACATGTGCATTGTGGCTTGGATTCTTTGGCCTGATGAAGAGAGTAACTCTAGTCCAAACCTGGATAAGGAGGTAAAGAAAAGGTTATCCCCCGAGGATGCAGCAGCAGCTAATCAGTGTGGCAGGTGGAGGAATCAGATGCGAAAAGCTGCTCATAATGGTTGCTGCCGTCGGGTTGCTCAAACACGGGCATTATGTTCTGTTCTCTGGAAATTGCTTGTTTCTGAGGAACTTGTAGAAGTGCTTATGGGAATAGAAATTCCACTGGTGAATATTCTTGCTGACATGGAGCTTTCGGGAATTGGTGTTGATTTGGAGAGATGTATCCATGCTCGGAAGTTGTTGGTGAAAAGGCTGAAGCAACTTGAGAAGGAAGCTTATAATCTGGCTGGAATGACATTTTCATTGAATATGCCAGCAGATATTGCAAAGGTCCTGTACGAACACTTGAAGCTGCCCATACCTGATGGTAAAAATAAGGGGAAACATCATCCGAGTACTGACAAACACTGTTTGGATGCACTAAGGCACGAACATCCCATTGTTCCAATCATCAAGGAGCATCGAACATTGGCAAAGCTGCTGAATTCTACACTAGGATCAATTTGTTCTTTGGCTAGGCTATCTGTTAGCACACAAAAGTACACATTACATGGTCGTTGGCTTCAAACATCCACAGCAACTGGTCGACTTTCAATGGAGGAACCTAATCTTCAGTGTGTTGAGCACGCAGTGGACTTCAAAATGAAAGGAGACAAAAATGAAGGCGATTCTGATGAGAGTTGTAGAATCAATGCTCGTGATTTCTTTGTTCCTACTCAGGATAATTGGTTACTGTTAACAGCAGATTATTCTCAGATAGAATTGAGGTTGATGGCACATTTCTCTAAAGATTCTTCTCTTATTGAACTTCTTAGTAAGCCGGATGGAGATGTCTTCACAATGATAGCAGCAAGATGGATTGGGTGTCCCGAGGTTTCTGTGGGTTCTCAGCAGAGAGAGCATACAAAAAAGATGGTGTACGGCATTCTTTATGGCATGGGACCAAATAGCCTTGCTGAACAGTTGGATTGCACTTCTGATGAAGCTGCTGAAAAGATTGGTAACTTCAAAAGCACTTTTCCTGGTGTTGCTTCTTGGCTTCATGAAGCAGTTGCATTTTGTCGTAGTAAAGGATATGTGGAGACTCTCAAAGGAAGAAAACGATTTTTGTCAAAAATAAAATTTGGCAGTAGTACAGAAAAATCAAGAGCTCAGAGGCAAGCTGTCAATTCCATTTGTCAGGGATCTGCTGCCGACATAATTAAAATTGCAATGATTAAAATTTACTCTGAAATTGTTACTGGAGTTGATAGCCTGGATTCAAGTTCTTCAGTCCCAACCAAGTTCCACATGCTTAGAGATCGTTGCCGGATTCTGTTACAGGTACATGATGAATTAGTGCTTGAAGTCGACCCCTCTGTAATAAAAGAAGCTGCACTACTGTTGCAGACCGGCATGGAGAACGCAGTCTCACTTCTTGTTCCTCTGAATGTCAAAATAAAGGTTGGAAGAACATGGGGATCTTTGGAATCATTTTCACCAGATAAATTCAAGGTTGACACTCCCATAGTTGAATCCTGA 6426 0.4143 MSPPRNRLHQFYATKKRKAVSPVSKRIEKGARLVVLDGSPSAKGSLETYLVPSQGDESVRPDSVRRNLASEIGSYVDKQPVESIQGVRDSPNTRIRIENEMLLVDDPVQVNNLSDFGQGGEKSELKQFKADFLSLYCSELRSGISSPMETRLKGHQRNESLTSVGENSSILQKCNDTSEPHFVCENISSGKIYVDIKSGGVRNTMESVPGRSAKVSDGGDTNAFDTSFRKCSYTPMSMNMAECHTPGSLIVKACVKGTTPKSTRGSSMFSPGEAFWDEAIQLADGLAVPMGNDSSKVIEESNAVGDQVEMKNSCNLQNYDGKARKILDQSKNTGLAEMHTKDSTKEASSLPVKHFDFSYEDNNMGENTLQNCRVNNLVNVTCGAGKPYESTSVASHTYEQTNEMQEKVLVDELGKRVKKNNFSMTHNNFDSPNNEARTSISTHASLEATTPSSRVSLDNHLDLHIWLPPEICSIYRKKGISKLYNWQVDCLRVNGVLQRRNLVYCASTSAGKSFVAEILMLRRVITTGKMAILVLPYVSICAEKAEHLEKLLEPLGKHVRSYYGNQGGGTLPKDTSVAVCTIEKANSLINRLLEEGRLSELGIIVIDELHMVGDPRRGYLLELMLTKLRYAAGEGISKSSDGESSGGSSDKTDPAQGLQIVGMSATMPNVAAVADWLQAALYQTEFRPVPLEEYIKVGSSIYNKSMELSRTIRKGADLGGKDPDHVVELCNEVVQEGHSVLIFCSSRKGCESTARHVAKFLKSFTVDINENNCEFADITSAINSLRKCPAGLDPVLEETFPAGVAYHHAGLTVEEREIVETCYRKGLLRVLTATSTLAAGVNLPARRVIFRQPRIGCDFIDGTRYMQMAGRAGRTGIDTKGESVLICKPEELKKVMGLLNDSCPPLHSCLSEDLNGMTHAILEVVSGGIVQTANDINRYVRCTLLNSTKPFLEVVKSAQESLRWLCQRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLIVLADLSRAREGFVLASDLHLVYLVTPINVDVEPDWELYYERFVKLSPLDQSVGNRVGVTEPFLMRMAHGGPMRYSSKSRDSTRWLHNKQRNQHGISGGTVNSDDQTLRVCRRFYVALILSLLVQETPVGEVCEAFKVARGMVQALQENAGRFASMVAVFCERLGWNDLEGLVAKFQNRVSFGVRAEVVELTNIPFVKGSRARALYKAGLRTPLAIAEASIPEIVKALFESSSWATEGSAQRSLQFSVAKKIKNGARRIVLDKAEEARIAAFSAFKSLGYNVPQLAPPISTAARDFIRKEAGSSSGSDTADTSHSFVDANHTDNSKIVALEKEKDLIKSSDNGALSSVEGKSDSAMPCIFSTVPAVVPTTNELSTTFGPVKIPDVTTLSLQSQKQNDKSSIHGGCHAHGSGEQDHKENVASGNMDSSSGKGPINAVSSPGGLDSFLDLWDTIPEFYFDIHYIKRLELHSAAPFEVHGIAICWENSPMYYINLPRDILLSYNRKDDGFSLSACSNKQKVPSSNTKQDLINAMNRWSRISKIIGKKNVRKFTWNLKIQIQVLKKPSVSVQRFGSLDTLDKNMDLEIVDSSYVLLPPIHVKAAIDMCIVAWILWPDEESNSSPNLDKEVKKRLSPEDAAAANQCGRWRNQMRKAAHNGCCRRVAQTRALCSVLWKLLVSEELVEVLMGIEIPLVNILADMELSGIGVDLERCIHARKLLVKRLKQLEKEAYNLAGMTFSLNMPADIAKVLYEHLKLPIPDGKNKGKHHPSTDKHCLDALRHEHPIVPIIKEHRTLAKLLNSTLGSICSLARLSVSTQKYTLHGRWLQTSTATGRLSMEEPNLQCVEHAVDFKMKGDKNEGDSDESCRINARDFFVPTQDNWLLLTADYSQIELRLMAHFSKDSSLIELLSKPDGDVFTMIAARWIGCPEVSVGSQQREHTKKMVYGILYGMGPNSLAEQLDCTSDEAAEKIGNFKSTFPGVASWLHEAVAFCRSKGYVETLKGRKRFLSKIKFGSSTEKSRAQRQAVNSICQGSAADIIKIAMIKIYSEIVTGVDSLDSSSSVPTKFHMLRDRCRILLQVHDELVLEVDPSVIKEAALLLQTGMENAVSLLVPLNVKIKVGRTWGSLESFSPDKFKVDTPIVES 2141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03070 2141 Coils Coil 1706 1726 - -
Car04g03070 2141 MobiDBLite consensus disorder prediction 1389 1433 - -
Car04g03070 2141 Gene3D - 1064 1207 - -
Car04g03070 2141 CDD DNA_pol_A_theta 1701 2124 - -
Car04g03070 2141 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 725 925 IPR001650 -
Car04g03070 2141 MobiDBLite consensus disorder prediction 636 655 - -
Car04g03070 2141 CDD DEXHc_POLQ-like 467 688 - -
Car04g03070 2141 Gene3D - 1888 2032 - -
Car04g03070 2141 PANTHER DNA POLYMERASE I 483 2129 IPR002298 GO:0003887|GO:0006261
Car04g03070 2141 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 493 685 IPR014001 -
Car04g03070 2141 SMART polaultra3 1864 2089 IPR001098 GO:0003677|GO:0003887|GO:0006260
Car04g03070 2141 Gene3D - 1827 2121 - -
Car04g03070 2141 Gene3D - 1434 1698 IPR036397 GO:0003676
Car04g03070 2141 Pfam DEAD/DEAH box helicase 496 669 IPR011545 GO:0003676|GO:0005524
Car04g03070 2141 Pfam Helicase conserved C-terminal domain 725 876 IPR001650 -
Car04g03070 2141 SUPERFAMILY DNA/RNA polymerases 1679 2124 IPR043502 -
Car04g03070 2141 CDD SF2_C_Ski2 687 888 - -
Car04g03070 2141 Pfam Helix-turn-helix domain 881 972 IPR046931 -
Car04g03070 2141 Gene3D - 467 688 IPR027417 -
Car04g03070 2141 PANTHER DNA POLYMERASE THETA 483 2129 - -
Car04g03070 2141 Gene3D - 697 897 IPR027417 -
Car04g03070 2141 MobiDBLite consensus disorder prediction 638 655 - -
Car04g03070 2141 Pfam DNA polymerase family A 1709 2122 IPR001098 GO:0003677|GO:0003887|GO:0006260
Car04g03070 2141 PRINTS DNA-polymerase family A (pol I) signature 1818 1840 IPR002298 GO:0003887|GO:0006261
Car04g03070 2141 PRINTS DNA-polymerase family A (pol I) signature 1934 1959 IPR002298 GO:0003887|GO:0006261
Car04g03070 2141 PRINTS DNA-polymerase family A (pol I) signature 1971 1982 IPR002298 GO:0003887|GO:0006261
Car04g03070 2141 PRINTS DNA-polymerase family A (pol I) signature 1993 2004 IPR002298 GO:0003887|GO:0006261
Car04g03070 2141 PRINTS DNA-polymerase family A (pol I) signature 2072 2085 IPR002298 GO:0003887|GO:0006261
Car04g03070 2141 SMART helicmild6 794 876 IPR001650 -
Car04g03070 2141 SUPERFAMILY Sec63 N-terminal domain-like 1104 1221 - -
Car04g03070 2141 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 496 890 IPR027417 -
Car04g03070 2141 SMART ultradead3 479 698 IPR014001 -
Car04g03070 2141 Gene3D Taq DNA Polymerase; Chain T, domain 4 1700 1810 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03070 Car-Chr4 58711163 58731715 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03070 K02349 - gmx:100813857 3241.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03070 04 58711163 58731715 Car04g03070 04 58711163 58731715 ECH