Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03023 ATGTTCGTTAGTTTGAAGAGCAAAAACATGGATGATAATGATGAAACGCAAATTGATAAGCAGAAGGAGGTTGAAATGGGAGCAATTAATATTGCAAATGATGGTGCACTTGTAGATGATGATGGCAAACCAAAACGAACAGGTACAACATGGACGGCAAGTGCGCATATCATAACGGCAGTGATTGGTGCTGGTGTGCTGACTTTACCATGGGTGATGGCTCAATTGGGATGGATCCTTGGTGTTTTATACATAATAATCATAGCTCTTGTCACACTTTACACTTCAAATCTTCTAGCTGATTGTTACAGAACACCAGACCCTGTCACTGGCAAAAGGAATCACACTTACATGGAGGCTGTTAAAACAATTTTAGGTGGTAGAATGCATTTGATATGTGGAATTGTTCAATATGTTAATCTTAGTGGAGCTGCAATTGGATACACAATAACTACATCTGTAAGCGTGGTGTCAATCAGAAAACTTAATTGCTTCCACAAAAGGGGAACTGATGCTCCATGTCATTATTCTAATAATCCATACATGATTGGCCTGGGAATTGTTGAAGTATTTTTGTCCCAAATACCCAATTTTCACAACTTGTCTTGGCTCTCAATAGTAGCTGCAGTCATGTCTTTTGGTTATGCATTTATTGGTATTGGTCTTTCTCTTGCTACCATCATCCAAGGGAAAGGAAAGAGTACCTCTTTAATAGGAGGAACCAAGGAGCAAAATTCAGGAGACAGAGTGTGGAATATGCTCATTGCATTGGGAAATGTTGCACTTGCTAGCAGCTATTCTCAAATTGCTATAGATATTCAGGATTCATTAAAGTCATCACCACCAGAAAATAAAGTGATGAAGATGGCAAACAAAGTAGGAATATTTGCAATGACAATAATCTTCCTCTTATGTGCTTGCTCTGGCTATGCTGCATTTGGTTCAAACACTCCAGGAAGCATTCTAATGGGCTCTGGCTTTAAAGAGCCTTTTTGGCTTCTTGATTTAGCTAATTTCTTCCTTATTGTTCATTTGGTTGGAGCATATCAGGTAATTGTCCAACCTATTTTTAGTGTGGTTGAAATGTTGGTTGGTCAAAGGTGGTCAGAATCAAGTTTCATTAATAAAGAGTACATAATGAGCATTGGAAAAATGAAGTTGAATTTCAATTTATTTAGGCTAATTTGGAGGACAATATTTGTGACAATAGTGACTGTTTTGGGAATGGCAATGCCATTTTTCAATGAAATGCTTGCACTTCTTGGAGCTATGGGATATTGGCCATTAACAATATATTTTCCAGTTCAAATGTATATTACCAAACAAAAGCTTAGGAGACCAACAATCAAATGGTTTGGACTTCAAGCATTGAACTTTATTTTTATGTTAGTGTCATTAGCTGCAGCATGTGCAGCCATTCGTGGGTTGCATGAAGCGTTTCATAAATACAAGCCCTTTATGTATAGAGTATAG 1473 0.3754 MFVSLKSKNMDDNDETQIDKQKEVEMGAINIANDGALVDDDGKPKRTGTTWTASAHIITAVIGAGVLTLPWVMAQLGWILGVLYIIIIALVTLYTSNLLADCYRTPDPVTGKRNHTYMEAVKTILGGRMHLICGIVQYVNLSGAAIGYTITTSVSVVSIRKLNCFHKRGTDAPCHYSNNPYMIGLGIVEVFLSQIPNFHNLSWLSIVAAVMSFGYAFIGIGLSLATIIQGKGKSTSLIGGTKEQNSGDRVWNMLIALGNVALASSYSQIAIDIQDSLKSSPPENKVMKMANKVGIFAMTIIFLLCACSGYAAFGSNTPGSILMGSGFKEPFWLLDLANFFLIVHLVGAYQVIVQPIFSVVEMLVGQRWSESSFINKEYIMSIGKMKLNFNLFRLIWRTIFVTIVTVLGMAMPFFNEMLALLGAMGYWPLTIYFPVQMYITKQKLRRPTIKWFGLQALNFIFMLVSLAAACAAIRGLHEAFHKYKPFMYRV 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03023 490 PANTHER ACID TRANSPORTER, PUTATIVE-RELATED 33 481 - -
Car04g03023 490 Pfam Transmembrane amino acid transporter protein 46 473 IPR013057 -
Car04g03023 490 PANTHER OS05G0424000 PROTEIN-RELATED 33 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03023 Car-Chr4 58113769 58116822 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03023 38 486 Organic Solute Cotransporters AT1G10010 51.991 1.58e-176 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03023 K24917 - gmx:100804643 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03023 04 58113769 58116822 Car04g03023 04 58113769 58116822 ECH