Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03022 ATGAGCATCTCCCAACCTCTTATGGCACTCCAATCTGACGACGATGGGAGGCTCTCAAGAACAGGGAATGTTTGGACTGCTACAACACACATAATAACAGTGGTGGTTGGGGCAGGGGTGTTAGCTCTAGCATGGGCCATGGCCCAATTAGGATGGATAGCCGGTATAGCGAGTATATTGATCTTTTCATCGATCTCAATTTTCACTTACAGTCTTGTATCCGATTGCTATAGGTTTCCAGATCCAATCAATGGCAAGAGAAATTATACTTACATGCAAGCTGTCAAGGCCTACTTAGGTGGAACAATGCATGTGATTTGTGGATTGATTCTGTATGGAAAGCTTGCTGGTATCACAGTGGGCTACACAATAACCTCATCCACAAGCTTGGCAGCAATAAAGAAAGCTGTCTGCGTCCATAGAAAAGGACATGAAGCTGATTGCAGGAGTTCTTATAATCCCTACATGATCGGTTTTGGAACATTGCAGATTTTTTTGTCTCAAATTCCAAACTTTCACAAATTGACATGGCTTTCAACAGTTGCTGCTATCACCTCATTTGGTTATGTATTCATTGCTGTTGGTCTTTGTCTCTCAGTCATTATCTCTGGAAAAGGGGCATCAACGAGCATAACTGGAACCAAAATAGGGCCAGAACTGTCTGCTGAAGATAAAGTGTGGAGGGTTTTCAGTTCAATGGGAAACATAGCACTTGCTTGCACATATGCTACCGTTATTTACGACATAATGGACACATTAAAGTCACACCCACCAGAAAATAAACAAATGAAAAAGGCCAACGTGATAGGGGTCTCAACAATGACAATGATATTCCTACTATGTAGTTGTCTTGGCTATGCTGCTTTTGGTGATCACACACCAGGAAACATTTTTGCTGGATTTTATGAGCCCTTCTGGTTGGTTGCCTTAGGAGACACATTCATCGTAATCCACATGATTGGAGCATATCAGGTGATGGGTCAACCATTCTTTCGTGTTGTTGAAATGGGTGCTAACATCATGTGGCCTGATTCAAATTTCATAAACAAGGAATATCCAATTAGTGTGTGTGGTATAACAATCAATTTGAATTTTTTTAGGCTAATTTGGAGGACAATATTCGTGATAATTGCAACAATTCTTGCCATGGCAATGCCATTTTTCAATGAGGTTCTTTCTTTGCTAGGAGCAATAGGGTTTGGTCCTTTAGTTGTCTTCTTCCCTATACAAATGCACATTGCTCAAAAGCAGATAAGAACTTTGTCAATGAAGTGGTGTGTGCTCCAATTTTTGAATTGTCTCTGTTTCATCGTTTCATTAGCCGCCATAGTTGCTTCAATTCATGAAATTAGCAAGGATCTCCATAAATACCAGATTTTTAAATATAAACAATAG 1395 0.4014 MSISQPLMALQSDDDGRLSRTGNVWTATTHIITVVVGAGVLALAWAMAQLGWIAGIASILIFSSISIFTYSLVSDCYRFPDPINGKRNYTYMQAVKAYLGGTMHVICGLILYGKLAGITVGYTITSSTSLAAIKKAVCVHRKGHEADCRSSYNPYMIGFGTLQIFLSQIPNFHKLTWLSTVAAITSFGYVFIAVGLCLSVIISGKGASTSITGTKIGPELSAEDKVWRVFSSMGNIALACTYATVIYDIMDTLKSHPPENKQMKKANVIGVSTMTMIFLLCSCLGYAAFGDHTPGNIFAGFYEPFWLVALGDTFIVIHMIGAYQVMGQPFFRVVEMGANIMWPDSNFINKEYPISVCGITINLNFFRLIWRTIFVIIATILAMAMPFFNEVLSLLGAIGFGPLVVFFPIQMHIAQKQIRTLSMKWCVLQFLNCLCFIVSLAAIVASIHEISKDLHKYQIFKYKQ 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03022 464 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 12 458 - -
Car04g03022 464 Pfam Transmembrane amino acid transporter protein 21 447 IPR013057 -
Car04g03022 464 PANTHER OS05G0424000 PROTEIN-RELATED 12 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03022 Car-Chr4 58106988 58111518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03022 2 461 Organic Solute Cotransporters AT1G58360 50.540 3.85e-174 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03022 K24917 - gmx:100810628 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03022 04 58106988 58111518 Car04g03022 04 58106988 58111518 ECH