Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03005 ATGGGTAGAAGTAGCACCAATTGGATTTGGTGGATTTTATGTGTGATTCACACACTTCCACTATTCATCAAAACAATCCATGGCTTAACCCCACAATCTCCAATTCAATGTAACCAAACAATTTGTACCCTTCAAAATTCCTATGGCACATGGAATGACCGTAAAATTTGCTATGCTCTAAATGTAACATACCCAACAAACGAAGAAGAACTTCGTTTAGCTGTTTCCTATGTTGTTCAAAACAACCTTAAAGCCAAAGTTGTCACAAAATTCTCACACACAATTCCAAAGCTCTCATGTCCACTACaacaacaaaatattattaataataataataatGTAAATTCTGCTTTTCTTATAAGCACTGAAAAGTATAATTCAGGAATTGAAATTGATGCTAAAAATTTGTTTGTTACGGTTGATTCGGGTGTTGGGCTTCGTCCATTGATTGATGAAGTTGAAAAAAATGGGTTTAGTTTGGGGGGTGTACCTTATTGGGAAGGTGTTAGTGTTGGGGGTGTAATTAGCACTGGAGCACATGGTAGTTCTTGGTGGGGTAAAGGTGGTGCTTTTCATGATCATGTTTTGGGTATTAATCTTGTTGTGCCTGCTTCTAAATCTGAAGGGTATGCTAAGGTTTTGAGGTTGGAACCAAATGATCCTCTTTTGAAAGCTGCCAAAGTTTCTCTAGGAGTCTTGGGTGCCATCTCCAAGGTAAAGTTATCAATTGAGCCTAGGTTCAAAAGAAGCATAACATACAATTTCACAGATGATACAGATATTGAAAATATATACATAGATCATGCAAAGAAGTATGAGTTTGCAGACATAACTTGGTATCCATCAAGAAATACAGCTGTTTACAGATATGATTTTAGGGTTCCCTTAAATACATCTGGTGATGGACATTTTGATTTCATTGGATTTCAAGCCAATCCCATCTTCATCTCTGAGTCCGTTAGAGGGGCAGAGAAATTGCTGGAAAACATGAGAAGCACAAAAGGAAAATGCTTAACAGCAGCTACTACCTTGGGATTCAAGAAATTAACAGCCAATGGTTTAAAGAACAATGGCCTAATTTTCACTGGCTACCCTGTAATTGGTTACCAAGGAAAAATGCAAACTTCAGGTTCATGTTTATATTCAACAAAATCAGATACATCATGTGCTTGGGATCCAAGAATCAAAGGATTGTTCTTCTATGAATCAACAGCTATTTTCCCTGCCTCAAAATTTAAAGACTTTATCATTGATGTCAAAAAATTAAGAGACATAGATCCACAAAAGTTTTGTGGCATAGACATTTACAATGGAATTTTGATACGTTACATTAAAGCCTCAGATGCATACTTAGGACAAATTGAAGACTCTATAGTAATTGATTTCAATTATTATCGTGCAAATGACCCTTTTACCCCTAGATTAAACCAAGATGTGTGGGAGGAATTGGAGCAACTTGCATTTTTCAAATATGGTGCTAAACCACATTGGGCTAAGAATAGGAACTTAGCATTTTTGGGGGTGCAAAAAAAGTATCCTAAGTTTAATCTTTTTATTGAAGCCAAAAATAAATTGGACCCACAAAGTGTGTTCTCTGGTGATTGGTCAGATGAGATTTTGTATGGAAAGGATTCAATAAAATATGATGGGTGTGCTTTGGAAGGACAGTGTATTTGTTCTGAAGATAGACATTGCAGTCCACAAAAAGGGTATTATTGTAAAAATGGTCTTGTCTACAATGAAGCTAGGGTTTGTAGGTATTCATCAACCTCTGCGTCTTTGGATTCACTCCAATGA 1797 0.3606 MGRSSTNWIWWILCVIHTLPLFIKTIHGLTPQSPIQCNQTICTLQNSYGTWNDRKICYALNVTYPTNEEELRLAVSYVVQNNLKAKVVTKFSHTIPKLSCPLQQQNIINNNNNVNSAFLISTEKYNSGIEIDAKNLFVTVDSGVGLRPLIDEVEKNGFSLGGVPYWEGVSVGGVISTGAHGSSWWGKGGAFHDHVLGINLVVPASKSEGYAKVLRLEPNDPLLKAAKVSLGVLGAISKVKLSIEPRFKRSITYNFTDDTDIENIYIDHAKKYEFADITWYPSRNTAVYRYDFRVPLNTSGDGHFDFIGFQANPIFISESVRGAEKLLENMRSTKGKCLTAATTLGFKKLTANGLKNNGLIFTGYPVIGYQGKMQTSGSCLYSTKSDTSCAWDPRIKGLFFYESTAIFPASKFKDFIIDVKKLRDIDPQKFCGIDIYNGILIRYIKASDAYLGQIEDSIVIDFNYYRANDPFTPRLNQDVWEELEQLAFFKYGAKPHWAKNRNLAFLGVQKKYPKFNLFIEAKNKLDPQSVFSGDWSDEILYGKDSIKYDGCALEGQCICSEDRHCSPQKGYYCKNGLVYNEARVCRYSSTSASLDSLQ 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03005 598 PANTHER GULONOLACTONE OXIDASE 29 588 - -
Car04g03005 598 PANTHER L-GULONOLACTONE OXIDASE 3 29 588 - -
Car04g03005 598 ProSiteProfiles PCMH-type FAD-binding domain profile. 55 246 IPR016166 GO:0071949
Car04g03005 598 SUPERFAMILY FAD-binding/transporter-associated domain-like 45 245 IPR036318 GO:0050660
Car04g03005 598 Gene3D - 127 245 IPR016169 -
Car04g03005 598 Pfam FAD binding domain 62 203 IPR006094 GO:0050660
Car04g03005 598 TIGRFAM pln_FAD_oxido: plant-specific FAD-dependent oxidoreductase 31 586 IPR010030 -
Car04g03005 598 Gene3D - 402 502 - -
Car04g03005 598 Pfam D-arabinono-1,4-lactone oxidase 408 537 IPR007173 GO:0003885|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03005 Car-Chr4 57797626 57801401 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03005 K00103 - gmx:100778616 896.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03005 04 57797626 57801401 Car04g03005 04 57797626 57801401 ECH