Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03000 ATGGCGTCTCTCCGGTTCCTTCCACCACCACAATCACAAAACCTAAATTCATTATCAACTGATTTCGTCAATCGCCGCGTTTCCTATCCTCAACAACAACTCAACTTCACAAAAATCACTGCTCTCACAAATTCTGACTCTTCTTCACCCTTACTTGATTCTAAAACTCAAGTATTAGATGTTGTTCCTCTTTTATCTTCCTCTGAGGCCTATGAAAGGTTGAAAACATTCAGAGAAAAGATAAAGGGAAAGCAGCAATATCTTGCCATGTATTCTAGTATTTTTGGTGGGATAACAACTGACCCTGCAGTTATGGTTATTCCTATGGATGACCACATGGTCCATAGGGGCCATGGTGTCTTTGATACTGCGGCAATAATGGACGGATATCTGTGTTCCCTAGATCAACACCTTGACCGCTTTTTAAATTCGGCATTGAGGTCTAAAATAGATCCCCCGTTTGATCGTGAAAATATACGAAGGATTCTCATACAAACTGTGAGTGCTTCCAAATGTAGAAATGGATCACTAAGATACTGGTTATCAGCAGGACCTGGTGATTTTCAGCTCTCTCCCTCTGGCGGCCATGAGTCAGCACTTTATGCAATTGTAATAAAGGACCTGTCACCGGCAGTTGTGACACCTGAGTCCAGGGGAGTTAAAGTCATCACTTCATCTATTCCAATAAAACATCCCATGTTTGCAGTCACTAAGAGTGTGAATTACCTTCCAAATGTGCTCTCGAAGATGGAGGCGGAAGAAGCTGGTGCTTTTGTAGGCATTTGGCTTGACAATGAAGGTTTTGTTGCTGAAGGGCCTAGTATGAATGTGGCTTTTGTCAATAAAGAGAAGGAACTTATAATGCCTCACTTTGACAAAATTCTAAGTGGTTGTACAGCTAAGAGAGTTTTAGCCCTTGCTGAGTGTTTGTTGAAGCAGGGTAAGCTTACAGGGATAAGGGTGAAAAATGTAACCGTTGAAGAAGGGAAGGAAGCAGATGAAATGATGCTTATTGGCAGTGGAGTTCTTGTTTGCCCTGTAGTGCAGTGGGATGAGCAGGTTATTGGAGATGGCAAAGAAGGCCACATAACACAGGCTCTCTTCGATCTAATTGTTGAGGACATGAAATCAGGCCCCCCTATTGTTCGGACACTCGTTCCATATTGA 1167 0.4259 MASLRFLPPPQSQNLNSLSTDFVNRRVSYPQQQLNFTKITALTNSDSSSPLLDSKTQVLDVVPLLSSSEAYERLKTFREKIKGKQQYLAMYSSIFGGITTDPAVMVIPMDDHMVHRGHGVFDTAAIMDGYLCSLDQHLDRFLNSALRSKIDPPFDRENIRRILIQTVSASKCRNGSLRYWLSAGPGDFQLSPSGGHESALYAIVIKDLSPAVVTPESRGVKVITSSIPIKHPMFAVTKSVNYLPNVLSKMEAEEAGAFVGIWLDNEGFVAEGPSMNVAFVNKEKELIMPHFDKILSGCTAKRVLALAECLLKQGKLTGIRVKNVTVEEGKEADEMMLIGSGVLVCPVVQWDEQVIGDGKEGHITQALFDLIVEDMKSGPPIVRTLVPY 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03000 388 Pfam Amino-transferase class IV 119 349 IPR001544 GO:0003824
Car04g03000 388 Gene3D - 214 378 IPR043132 -
Car04g03000 388 CDD PLPDE_IV 111 371 - -
Car04g03000 388 Gene3D - 67 206 IPR043131 -
Car04g03000 388 PANTHER AMINO-ACID AMINOTRANSFERASE 61 386 - -
Car04g03000 388 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 95 376 IPR036038 GO:0003824
Car04g03000 388 PANTHER BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE-LIKE 61 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03000 Car-Chr4 57763287 57767241 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03000 K18482 - gmx:100794026 565.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03000 04 57763287 57767241 Car04g03000 04 57763287 57767241 ECH