Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02956 ATGAAGAGTAGTAAGAGAGAAATGGAGAAGAAATCAGAAATAAGTTGTGTCATTGAAGAGCTTTCTATGGTAGTAATAATTAAGCCTTGTGAAAATCATGAAGATGCTCATATCCCTACCAAGCCTTTTCTCTCTATATGTTATTTGGTTCTACAAGTTCTTGATAAAATAGGGCCAACAATGGCTGTTTTGAGACAAGATGTCTACCAAAATATCAAGAGTTTGGAACTAATGCATGAATCGAATCCAACAGCAAATCCAAATTTGGTTGAAATACTGAAATTAGAAGCAAGAGAAGGGAATGCAAAGAAGAGGTCAAGCTGCAGTAAGGCCTTTGTTTGGCTCACAAGGACCTTGGATTTCACCTCATCATTATTACAAATACTATCAAAAGATCTTGAAAAGAAAATGGAGAATGTAGTTGAAGAGTGTTATGACGTAACATTAAAACCATGGCATGGATGGATTTCATCAACTGCTTTCAGAGTGGCTCTAAAATTAGTTCCAGAAAGTAAAACATTAATTAATCTCCTTAAGAGTGAAGATGAAGACCATGACATGCTGAAGCAGAAAATGCAGATTTTGGTTTCTCTACTTGTGCCTTTTCTTGAGGATATCCACTGTGTTCTTAGATTGTATAACTTGGACAAGCTGAAATCAACCTGA 666 0.3574 MKSSKREMEKKSEISCVIEELSMVVIIKPCENHEDAHIPTKPFLSICYLVLQVLDKIGPTMAVLRQDVYQNIKSLELMHESNPTANPNLVEILKLEAREGNAKKRSSCSKAFVWLTRTLDFTSSLLQILSKDLEKKMENVVEECYDVTLKPWHGWISSTAFRVALKLVPESKTLINLLKSEDEDHDMLKQKMQILVSLLVPFLEDIHCVLRLYNLDKLKST 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02956 221 PANTHER GLYCOLIPID TRANSFER PROTEIN (GLTP) FAMILY PROTEIN 3 218 - -
Car04g02956 221 Pfam Glycolipid transfer protein (GLTP) 38 178 IPR014830 GO:0005737|GO:0120009|GO:0120013
Car04g02956 221 SUPERFAMILY Glycolipid transfer protein, GLTP 33 218 IPR036497 -
Car04g02956 221 Gene3D Glycolipid transfer protein 3 217 IPR036497 -
Car04g02956 221 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 3 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02956 Car-Chr4 56797533 56801642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02956 13 203 Acyl Lipid Metabolism Gene Families AT2G34690 22.396 1.73e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02956 - - gmx:100803131 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02956 04 56797533 56801642 Car04g02956 04 56797533 56801642 ECH