Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02948 ATGCATATTCAAACTTGTCACTCCATGACGACACTTCCTTTAACATGGAACATTCCAACACATGTAAACTATCGAACTCATCGccacctattaccaccaccaaaatcaaccatcaccgccacaccaccaccacTAAAAATCCACAAAACTCACTCATTGCCACCGGAAAAAGTTGAAATTTTCAAGTCACTTGAAAATTGGGCCTCAGAATCGGTCTTACCACTTCTAAAGCCCGTTGAACAATGCTGGCAGCCACAGAATTTTCTCCCTGATCCATCATTACCGTTCGATGAATTCACAGATCAAGTGAAATCTCTTCGTGAACGAACAAAAGAGCTTCCAGATGAATATTTTGTGGTGTTGGTTGGTGATATGGTGACGGAAGAGGCGCTTCCGACATATCAGAGTATGATTAATAATCTTGATGGAGTTGGGGATGAGGTTGGATCAAGTCCAAGCCCATGGGCCGTTTGGACCCGGGCTTGGACTGCCGAAGAAAATAGACATGGGGATTTGCTTAAGACTTATTTGTATCTTTCTGGTCGGGTTGATATGGAGATGATTGAAAAGACCGTTCAGTACCTCATTGGAGCTGGCATGGACCCAGGTACAGAAAACAACCCATATTTAGGGTTCGTGTACACCTCATTCCAAGAACGAGCAACCTTCGTATCACACGGCAACACTGCTCGTCTAGCGAAAGAAGGTGGCGATCCAGTGCTTGCACGCATATGCGGTACCATAGCAGCAGACGAAAAGCGTCACGAGAACGCATACTCAAAAATCGTTGAGAAGCTTCTAGAAGTGGATCCCAGTGGAGCAATGTTAGCCATTGGTGATATGATGGAAAAAAAGATCACAATGCCGGCACACCTTATGTACGATGGACATGACCCCAAGCTATTCGAGCACTTTGCGGCTGTGGCGCAGCGTACGGGCGTGTACACGGCAAATGATTACGCTGATATTTTGGAGTTTTTGGTCCAACGGTGGAGATTAGAGAAGCTGGAGGGATTGACGACTGAGGGGAAAAGGGCGCAGGAATATGTGTGTGGGTTAGCGCCTAGGATTAGAAGGCTGCAAGAGCGTGCTGATGCACGTGCTCGTAACATGAAACCACATGGGGTTAAGTTTAGTTGGATTTTTAATAACGAGGTTGTTTTGTGA 1167 0.437 MHIQTCHSMTTLPLTWNIPTHVNYRTHRHLLPPPKSTITATPPPLKIHKTHSLPPEKVEIFKSLENWASESVLPLLKPVEQCWQPQNFLPDPSLPFDEFTDQVKSLRERTKELPDEYFVVLVGDMVTEEALPTYQSMINNLDGVGDEVGSSPSPWAVWTRAWTAEENRHGDLLKTYLYLSGRVDMEMIEKTVQYLIGAGMDPGTENNPYLGFVYTSFQERATFVSHGNTARLAKEGGDPVLARICGTIAADEKRHENAYSKIVEKLLEVDPSGAMLAIGDMMEKKITMPAHLMYDGHDPKLFEHFAAVAQRTGVYTANDYADILEFLVQRWRLEKLEGLTTEGKRAQEYVCGLAPRIRRLQERADARARNMKPHGVKFSWIFNNEVVL 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02948 388 Pfam Fatty acid desaturase 56 382 IPR005067 GO:0006631|GO:0045300
Car04g02948 388 SUPERFAMILY Ferritin-like 46 387 IPR009078 -
Car04g02948 388 PANTHER STEAROYL-[ACYL-CARRIER-PROTEIN] 9-DESATURASE 6, CHLOROPLASTIC 33 387 - -
Car04g02948 388 PIRSF Dlt9_acylACP_des 17 388 IPR005067 GO:0006631|GO:0045300
Car04g02948 388 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 33 387 IPR005067 GO:0006631|GO:0045300
Car04g02948 388 CDD Acyl_ACP_Desat 56 364 IPR005067 GO:0006631|GO:0045300
Car04g02948 388 Gene3D Ribonucleotide Reductase, subunit A 43 388 IPR012348 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02948 Car-Chr4 56700128 56702002 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02948 33 386 Acyl Lipid Metabolism Gene Families AT1G43800 77.095 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02948 K03921 - gmx:100037478 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02948 04 56700128 56702002 Car04g02948 04 56700128 56702002 ECH