Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02947 ATGGTGAATGGAGAAGATTTATACAACGTGATGTGTGCAATGATACCTCTATATTTTGCAATGCTAATAGCATATGGTTCAGTGAAATGGTGCAAAATGTTCACCCCTGAACAATGTTCAGGCATAAACCGATTTGTGGCAGTGTTTGCTGTTCCAGTTCTATCTTTTCATTTTATTTCACTCAACAATCCTTATCAAATGGACACTATGTTCATTGTAGCTGACACAATTTCAAAGCTACTTGTTTTATTATTTCTTTCTATTTGGGCCATTTTCTTTACTAAAGGCTCATTGGATTGGCTCATTACTCTTTTTTCACTTGCCACTTTGCCTAATACCCTTGTTATGGGTATTCCTCTCCTTCAAGCTATGTATGGTGATTTTACACAAACTCTCATGGTGCAACTTGTCGTCCTACAATGCATCATTTGGTATACTCTGCTACTATTCCTACTGGAATACAGAGCAGCAAAACTTCTAATAAAAACCGAGTTCCCGGGAGCCACCGCGTTATCCATAACTAAATTCGAACTCGACGGCGATGTTATTTCTCTTCACGGCCACGAACCACTCCAAACCCAATCACTAACCGACCAAAACGGCCACATTAAAGTCCGAATTCGTCGCTCAATTTCCTCAGCACCACCGGAATCAACTTCCTCAATCGGTAACGGCATCACTCCATTTCGTCTCTCCAATCTCTCCAATGCCGACATCTTCTCCATCAACACGCCGATTCAGTTTCTCGATAATGCGAGTCCTCGTCTCTCCGGTTACGCTTCGACGGATGCTTATTCGCTGCAGATGACTCCGAGGAGGTCGAATGTTAATGAAGGGGAGATTTGTACGCCGGTGTGGGGGAGGTCGCCGGTGGATGGAGGGAGGAGGAATTCGCCGGGGATGAATGGAGGGAGGGTGATTTGGGATTCGCCGGAGAAATGGAGGGGAGAAGAGAGACAAGGATGCAAGGATATTAGTATGTCAGATAAAGAAATCAGCTTCAGAGACAGTCTCAAAGTCTCAGTGCCAGGGGAAGGTGTGGACCCCAAAGATGAAATTGCCAGTGACCAGAAAATGCCATATGCCTTTGTAATGTTGAGGCTTATACTTATAGTAGTTGGAAGAAAACTTTCTAGAAACCCTAATACATATTCTAGTCTATTAGGACTTCTCTGGTCTCTAATCTCCTTCAAATGGAACATAGAAATGCCCAGTCTTATCAAATCATCAATCAAAATCATATCCGATGCAGGTCTTGGAATGGCAATGTTTAGTTTAGGGCTTTTCATGGCACTTCAGCCACGAATCGTTGCTTGTGGTACCAAAAGAGCAACCATGGGAATGGCCATTAGATTCCTATGTGGCCCTCTTGTAATGTCATTAACTTCCATTGCCATTGGATTGAGAGGAAAAAAGCTGCATACTGCCATTGTGCAGGCTGCTCTTCCGCAAGGGATAGTGCCATTTGTATTTGCAAGGGAATATGGGCTCCATCCTGATATTTTGAGTACAGGGGTAATCTTTGGCATGTTAGTTTCCTTGCCAATAACTCTCATTTACTACATATTTCTTGGCTTGTGA 1581 0.4314 MVNGEDLYNVMCAMIPLYFAMLIAYGSVKWCKMFTPEQCSGINRFVAVFAVPVLSFHFISLNNPYQMDTMFIVADTISKLLVLLFLSIWAIFFTKGSLDWLITLFSLATLPNTLVMGIPLLQAMYGDFTQTLMVQLVVLQCIIWYTLLLFLLEYRAAKLLIKTEFPGATALSITKFELDGDVISLHGHEPLQTQSLTDQNGHIKVRIRRSISSAPPESTSSIGNGITPFRLSNLSNADIFSINTPIQFLDNASPRLSGYASTDAYSLQMTPRRSNVNEGEICTPVWGRSPVDGGRRNSPGMNGGRVIWDSPEKWRGEERQGCKDISMSDKEISFRDSLKVSVPGEGVDPKDEIASDQKMPYAFVMLRLILIVVGRKLSRNPNTYSSLLGLLWSLISFKWNIEMPSLIKSSIKIISDAGLGMAMFSLGLFMALQPRIVACGTKRATMGMAIRFLCGPLVMSLTSIAIGLRGKKLHTAIVQAALPQGIVPFVFAREYGLHPDILSTGVIFGMLVSLPITLIYYIFLGL 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02947 526 Pfam Membrane transport protein 10 521 IPR004776 GO:0016021|GO:0055085
Car04g02947 526 TIGRFAM 2a69: auxin efflux carrier 1 526 IPR014024 -
Car04g02947 526 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 526 - -
Car04g02947 526 PANTHER AUXIN EFFLUX CARRIER COMPONENT 6 1 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02947 Car-Chr4 56685918 56691238 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02947 1 504 Organic Solute Cotransporters AT1G77110 62.032 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02947 K13947 - gmx:100800139 799.66