Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02936 ATGGTGAAGGAAACAGAGTATTACGATATTCTCGGAGTTTCTCCTTCTGCCTCCGATGGCCAAATTCGCAAGGCTTATTATCACAAGGCAAAGCAAGTTCATCCTGATAGAAACCTTAACGATCCTCATGCTGCACAAAAATTTCAGATTTTAGGCGAAGCATATCAGGTTTTGAGTGATGCGGTACAGAGGAGAGCGTATGATCAAAATGGGAAGCATTCTGTATCTAGAGAAACTATGCTTGATCCCATGGCTGTCTTCGCCCTGCTCTTTGGAAGTGAATTGTTTGAGGACTATGTTGGGCATCTAGCTGTTGCGTCGATGGCTTCTTCTGAACTAGCTAATGAAAGTGAGGATTTGCAGGAAAAGCTAAAGGCAAGCGTTGTTCAGAAAGAAAGGGAAGAAAAGCTAGCAAGATTTTTAAAAGATTTTCTTAGCCAATATGTCCGTGGTGACCAAAAGGGTTTTTTCCACCGCGCAGAATCTGAAGCCAGACGCCTTTCTCTTGCAGCCTTTGGAGTCGACATGTTACATACCATAGGCTATATATACTCAAGACAAGCAGCACAAGAACTAGGGAAAAAGGCTCTTTATCTTGGAGTGCCATTTCTGGCTGAATGGGTTCGTAATAAAGGACATTTTTTGAAATCACAGTTAACAGCTGCTAAAGGGGCTTATCAGTTGCTCCAACTTCAAGAAGACATCCACAAGCAATTTAAATTGGATGGTAGTTTCTCTGAAGATGTTGACTCGCATATTCGTCTTAATAAGGATACTTTGTTGAATTCCTTGTGGAAGTTAAATGTAGTGGACATAGAAGTAACCCTTGCACATGTGTGTCAAATGGTGACAACTGATATAAATGTGATGTGCTTCCTTCAGGAAAAGAATTCAAAAGGTGAAACACTGAAGAAGAAACTAGCTGTTGATTCTGATGACGAAGGAAGCAGCTCTGATTCATCAGACGATGAATCACATAGAGCACTTACCTATCGAACTCCATTTTTCACTCAGGGTCTTGGTAGGCTCTTCAAATGCCTTTGTAATCCAGCATTTGATGTGGATGATGACGAGATAGTTTACAACGGCAAATGA 1095 0.4119 MVKETEYYDILGVSPSASDGQIRKAYYHKAKQVHPDRNLNDPHAAQKFQILGEAYQVLSDAVQRRAYDQNGKHSVSRETMLDPMAVFALLFGSELFEDYVGHLAVASMASSELANESEDLQEKLKASVVQKEREEKLARFLKDFLSQYVRGDQKGFFHRAESEARRLSLAAFGVDMLHTIGYIYSRQAAQELGKKALYLGVPFLAEWVRNKGHFLKSQLTAAKGAYQLLQLQEDIHKQFKLDGSFSEDVDSHIRLNKDTLLNSLWKLNVVDIEVTLAHVCQMVTTDINVMCFLQEKNSKGETLKKKLAVDSDDEGSSSDSSDDESHRALTYRTPFFTQGLGRLFKCLCNPAFDVDDDEIVYNGK 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02936 364 Pfam DnaJ domain 6 68 IPR001623 -
Car04g02936 364 CDD DnaJ 6 60 IPR001623 -
Car04g02936 364 Pfam X-domain of DnaJ-containing 130 289 IPR026894 -
Car04g02936 364 Coils Coil 114 134 - -
Car04g02936 364 SUPERFAMILY Chaperone J-domain 2 101 IPR036869 -
Car04g02936 364 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Car04g02936 364 SMART dnaj_3 5 63 IPR001623 -
Car04g02936 364 PRINTS DnaJ domain signature 63 82 IPR001623 -
Car04g02936 364 PRINTS DnaJ domain signature 43 63 IPR001623 -
Car04g02936 364 PRINTS DnaJ domain signature 8 26 IPR001623 -
Car04g02936 364 PRINTS DnaJ domain signature 26 41 IPR001623 -
Car04g02936 364 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Car04g02936 364 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 348 - -
Car04g02936 364 Gene3D DnaJ domain 1 85 IPR036869 -
Car04g02936 364 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02936 Car-Chr4 56539702 56544771 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02936 22 81 Miscellaneous Gene Families AT1G16680 45.000 2.44e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02936 - - gmx:100793811 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02936 04 56539702 56544771 Car04g02936 04 56539702 56544771 ECH