Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02921 ATGAAAGTGACATGGAAGAAGAAGAACAAACGTGGTTTACCCGCCGCCTTATCACTCTTTGAACCTAATTCACAGTCAAACAACGACGCTACTACTCAACATGATTGTGATGATGGAACTCCCAAATCTACGCAATTAGCTATGCAATTTCAAGCCCAAGGAGACAACCTTGCTATGGAGGGGAAGTATAGGGAAGCACTGGGTAAATGGGAAACTGCTATTACATTGGCACCTGATGTTGCAGTTTTGCATGAACAAAAGGCCCAAGTTTTACTAGAAATTGGAGATGCTTGGAATTCCTTAAAGGCTGCAACTCGAGCTACTGAATTGAAACCATCGTGGGCTGAGGCATGGGTCACACTTGGCCGAGCACAGCTGAATTATGGTGAGCCAGATAATGCTATTGAAAGTTTTGACAGAGCTTTAGCTCTCAAGCCTGATTATGAGGAAGCACAAGATGATAGAAAAACTGCATTACGGCTTGTAAAGAAGAGAAAGCAACTTCAATCATCAGGCTTGAGTGCCATCCAAAATCGTTATACTGTAGGTGATAATAAGAATGAAAGCTCATGA 573 0.4241 MKVTWKKKNKRGLPAALSLFEPNSQSNNDATTQHDCDDGTPKSTQLAMQFQAQGDNLAMEGKYREALGKWETAITLAPDVAVLHEQKAQVLLEIGDAWNSLKAATRATELKPSWAEAWVTLGRAQLNYGEPDNAIESFDRALALKPDYEEAQDDRKTALRLVKKRKQLQSSGLSAIQNRYTVGDNKNESS 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02921 190 MobiDBLite consensus disorder prediction 19 42 - -
Car04g02921 190 Gene3D Tetratricopeptide repeat domain 38 182 IPR011990 GO:0005515
Car04g02921 190 SUPERFAMILY TPR-like 45 166 IPR011990 GO:0005515
Car04g02921 190 SMART tpr_5 115 148 IPR019734 GO:0005515
Car04g02921 190 SMART tpr_5 47 80 IPR019734 GO:0005515
Car04g02921 190 SMART tpr_5 81 114 IPR019734 GO:0005515
Car04g02921 190 ProSiteProfiles TPR repeat profile. 115 148 IPR019734 GO:0005515
Car04g02921 190 MobiDBLite consensus disorder prediction 1 42 - -
Car04g02921 190 Pfam Tetratricopeptide repeat 115 148 IPR001440 GO:0005515
Car04g02921 190 ProSiteProfiles TPR repeat region circular profile. 115 147 - -
Car04g02921 190 PANTHER OSMOSIS RESPONSIVE FACTOR 1 189 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02921 54 159 EF-hand Containing Proteins AT2G32450 33.019 1.73e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02921 - - gmx:100305761 271.552