Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02913 ATGAATGCCATAGCTACTGCTTCTTCTCTCTCTCTTCCAATCTTTTGTAGAACTTCCAAGCTTGATACCAAAAGAGGTTTGAAAGGTAAATTTGGAGTGTTTGCTGTGTTTGGAGAAGAACTAGAGAAGAAAAATTCATGGGGTACGATATTTGATGTAGAAGATCCAAGATTGAAAGTGCCATTGAGTAAAGGGAAAACTTTGGATGTATTTCAAGCTTTAGAAGTAGCTAGGCAGGATATTCAGTACTGTGATTGGCGAGCTCGCCAAGATGTGCTTACCATCATGCTCCTCCATGAAAAGGTGGTTGAAGTTCTTAATCCTCTAGCTCGTGAATACAAGTCGATCGGCACCATGAAAAAGGATCTAGCTGAGTTGCAGGACGAATTAGCAGAAGCACACAGACAGGTTCATATATCGGAAACAAGAGTTTCCACTGCTTTAGATAAACTAGCTTACATGGAAGAATTGGTAAATGATAGGCTATTGCAAGACAGAAGCACGGCTGAAGTTGATGAGACATCCTCGTCTCCCAGCACGTCTGAAAAATCTGTACGTACCGAAAGAAGAAGGAAGCCGCGGAAAAGATTGAATGTATCAGGTCCAGTTCAGTCATACCATCCTAACTTAAAGAATTTCTGGTATCCTGTTGCGTTCTCTGCCGACTTAAAGGATGATACCATGATCCCAATGGAATGTTTCGAGGAACCGTGGGTTATCTTTAGGGGTAAAGATGGCAAACCTGGATGTGTCCAGAATACTTGTGCACATAGAGCATGTCCACTGCACCTTGGCTCGGTAAACGAGGGTCGTATCCAATGCCCTTACCATGGCTGGGAATATACGACAGACGGAAAATGCGAGAAAATGCCGTCTACTCGAATGCTAAATATAAAGATAAAGTCAGTTCCTTGTTTTGAGAAAGAAGGGATGATCTGGATTTGGCCTGGCAATGATCCCCCAACGGCGACACTTCCATCTTTACTACCTCCTTCTGGATTTGTAGTCCACGCTGAGATTGTCATGGAACTTCCGGTTGAACATGGATTACTTTTGGACAACCTTTTGGATCTTGCGCATGCCCCTTTTACTCATACTTCAACGTTCGCAAAGGGATGGAGTGTTCCGAGCTTTGTGAACTTTTTGACACCTGCATCTGGCCTTCAAGGATACTGGGATCCTTATCCAATCGATATGGAGTTTCGTCCACCTTGCATGGTTCTATCAACCATTGGAATTTCAAAGCCTGGGAAACTGGAGGGACAAAGCACTAAAGAATGTGCAACACACCTGCACCAACTTCATGTATGCTTACCATCTTCAAAACATAAAACAAGATTGTTATACAGAATGTCGCTGGATTTCGCTCCTCTACTTAAGCATGTTCCTTTTATGCAACATTTATGGAGGCATTTTGCAGAACAGGTTTTAAATGAGGATCTAAGGCTAGTATTGGGTCAACAAGAGAGAATGAACAATGGTGCAAATGTATGGAATGTGCCAGTTACCTATGACAAGCTTGGAATAAGGTATAGGCTTTGGAGGGATGCATTGGAAAATGGAGCTAAACAACTACCCTTCAACACATAA 1590 0.4258 MNAIATASSLSLPIFCRTSKLDTKRGLKGKFGVFAVFGEELEKKNSWGTIFDVEDPRLKVPLSKGKTLDVFQALEVARQDIQYCDWRARQDVLTIMLLHEKVVEVLNPLAREYKSIGTMKKDLAELQDELAEAHRQVHISETRVSTALDKLAYMEELVNDRLLQDRSTAEVDETSSSPSTSEKSVRTERRRKPRKRLNVSGPVQSYHPNLKNFWYPVAFSADLKDDTMIPMECFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYTTDGKCEKMPSTRMLNIKIKSVPCFEKEGMIWIWPGNDPPTATLPSLLPPSGFVVHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSFVNFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQSTKECATHLHQLHVCLPSSKHKTRLLYRMSLDFAPLLKHVPFMQHLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNVPVTYDKLGIRYRLWRDALENGAKQLPFNT 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02913 529 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 70 528 - -
Car04g02913 529 Gene3D - 208 330 IPR036922 GO:0051537
Car04g02913 529 MobiDBLite consensus disorder prediction 166 203 - -
Car04g02913 529 CDD Rieske_RO_Alpha_Cao 197 325 - -
Car04g02913 529 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 214 314 IPR017941 GO:0051537
Car04g02913 529 Pfam Vanillate O-demethylase oxygenase C-terminal domain 347 371 IPR044043 GO:0016491
Car04g02913 529 PANTHER CHLOROPHYLLIDE A OXYGENASE, CHLOROPLASTIC-LIKE 70 528 - -
Car04g02913 529 Pfam Pheophorbide a oxygenase 401 496 IPR013626 GO:0010277
Car04g02913 529 SUPERFAMILY ISP domain 209 319 IPR036922 GO:0051537
Car04g02913 529 Gene3D - 336 524 - -
Car04g02913 529 Pfam Rieske [2Fe-2S] domain 214 296 IPR017941 GO:0051537
Car04g02913 529 ProSitePatterns Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 255 277 IPR015881 GO:0005506|GO:0051537
Car04g02913 529 SUPERFAMILY Bet v1-like 310 518 - -
Car04g02913 529 Coils Coil 116 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02913 Car-Chr4 56228385 56236111 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02913 K13600 - gmx:100805998 960.674
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02913 04 56228385 56236111 Car04g02913 04 56228385 56236111 ECH