Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02838 ATGTTTGTCCAGTGGCAGAAATGGAGAGAGACTATGGTGCCTAATGGGTTCATTTCAGATTCTGAAGTTCCTGATGAATTGGAAACTAGAAAGATCTTTTTGCAAGGATTGTCTAAGGATAAATACCCTGTGATGATTGTCAAAGCAAGTAGACACTTCCCTTCCAAGGATCAGATTCAATTCAAGAAATTTGTTATACATTTACTGGACAAGACAATTGCAAGTGCTTTCAAGGGAAGGGAGGTAGGAAATGAAAAGTTGATTGGGGTTCTTGATCTGCAGAATATTTCGTATAAGAATGTCGACCCACGTAGTTTAATTACTGGATTTCAATTTATACAGGCTTACTACCCTGAACGTTTAGCAAAGTGCTATATTTTACATATGCCATGGTTTTTTGTGAGTGTTTGGAAACTAGTTTCTGGATTCCTAGACAAATCAACTCAAGAAAAGATTGTAATTATAAACAACGAGAATGAGAGAAAGGAGTTCATTAGTGATGTTAGTGAAGAAGTTCTCCCTGAAGAGTATGGTGGAAGAGCAAAGCTTGTAGCTATCCAAGATGTTGAAGTCAGACCACTGGAAAATGGAAAAACAAATTGA 603 0.3698 MFVQWQKWRETMVPNGFISDSEVPDELETRKIFLQGLSKDKYPVMIVKASRHFPSKDQIQFKKFVIHLLDKTIASAFKGREVGNEKLIGVLDLQNISYKNVDPRSLITGFQFIQAYYPERLAKCYILHMPWFFVSVWKLVSGFLDKSTQEKIVIINNENERKEFISDVSEEVLPEEYGGRAKLVAIQDVEVRPLENGKTN 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02838 200 PANTHER SEC14 CYTOSOLIC FACTOR-LIKE 1 192 - -
Car04g02838 200 SUPERFAMILY CRAL/TRIO domain 20 182 IPR036865 -
Car04g02838 200 CDD SEC14 33 179 IPR001251 -
Car04g02838 200 PANTHER OS03G0850700 PROTEIN 1 192 - -
Car04g02838 200 SMART sec14_4 26 182 IPR001251 -
Car04g02838 200 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 20 185 IPR001251 -
Car04g02838 200 Gene3D - 1 191 IPR036865 -
Car04g02838 200 Pfam CRAL/TRIO domain 28 179 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02838 Car-Chr4 55118313 55123740 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02838 1 156 Acyl Lipid Metabolism Gene Families AT5G47730 25.294 5.43e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02838 - - gmx:100811048 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02838 04 55118313 55123740 Car04g02838 04 55118313 55123740 ECH