LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car04g02759	ATGGATTCTGATTATGGTATTCCAAGAGAACTCTCAGATCTTCAAAAGCTTCGATCTTTATACCAACCTGAACTCCCTCCTTGTCTACAGGGTACAACTGTTAGGGTTGAATTTGGTGATGCAACAACAACTGCTGACCCTTCTGATGAACCTTCTATTACTCATTTTCTTAGGGCTACTGCTAAAGTTCCTGATGCTCAGATCATAACTGAACACCCTCCTATTAGGGTTGGACTTGTTTTCTGTGGAAGACAATCTCCTGGCGGACACAATGTTATTTGGGGTCTTCACTCTGCTCTCAAGATTCACAATCCTTACAGCGTTTTACTTGGATTTCTTGGTGGTTCTGATGGTCTATTTGCTCAGAAAACTTTGGAGATAACTGAAGATATTCTTTCTACATACAAAAATCAAGGTGGTTATGATTTGCTTGGCCGGACGAAAGATCAAATTAGAACCACAGAACAAGTTAATGCTGCACTTGCCGCATGCAATGATTTGAAACTTGATGGACTTGTCATAATTGGAGGTGTGACATCTAACACAGATGCCGCACAGCTTGCAGAAACATTTGCTGTTGCGAAATGCCCCACAAAGGTGGTTGGTGTTCCTGTGACTTTGAACGGAGATCTTAAAAACCAGTTTGTGGAAACAAATGTTGGTTTTGATACAATTTGTAAGGTGAATTCTCAGCTCATTAGCAACGTCTGCACTGATGCTCTCTCTGCAGAGAAGTATTATTATTTCATTCGGCTTATGGGACGTAAGGCATCGCACGTTGCTTTGGAATGCACTCTTCAGTCCCATCCTAACATGGTAATTCTTGGTGAGGAGGTTGCTCAATCAAAGCTTACCCTTTTTGAAATTTCCAGAAAGATTTCTGATGCTGTTCAGGCTAGAGCAGAGCAAGACAAATATCATGGAGTGATCCTCCTTCCAGAAGGTCTGATAGAGAGCATTCCTGAAGTGTATGCACTGTTAAAGGAAATTCACGGTTTACTCAGACAAGGTGTTGATGCTGACAAGATATCTTCTCAGCTTTCACCCTGGGCTTCTGCTTTATTTGAATTTTTACCACCATTTATCAGGAGACAGCTACTCCTTTACCCTGAATCAGATGACTCAGCACAGTTGTCTCAGATTGAGACTGAGAAACTTCTAGCATACCTTGTGGAAGTAGAGATAAACAAGCGTCAGAAAGAAGGCACATACAAGGGAAAGAAATTCAATGCCATTTGCCACTTTTTTGGTTATCAAGCTCGAGGATCGCTTCCATCAAAGTTTGACTGCGACTATGCATATgttcttggacacatctgctaccatatactggctgctggtttgaatggatacatggcaactgtaactaacttgaagaatcctgtaaacaagtggaaatgtggtgctgctccaatttcaTCTATGATGACGGTGAAGCGTTGGTCTCCGAATCCAGGAGCCACATCAATTGGAAAACCTGCTATCCATCCAGCTGCTGTGGATTTGAGAGGCAAACCATATGAGCTGTTGCGTAAAAATGCGACAAGCTTTCTTCTGGACGATATTTACAGAAATCCAGGCCCACTTCAGTTTGACGGTCCTGGTGCAGATGCCAAGCCATTAACTCTTTCTGTTGAAGACCAAGACTACATGGGTCGGATCAAGAAACTTCAAGAGTACCTTGAACAGGTACGGAACATTGTAAAGCCAGGGTGCCCTCAAGAGGTTCTGAAAGCTGCATTGAGCGTCATGGGATCCGTTACCGAAGTTCTAACTGCAATGTCATCATCTTCCACCAACCTGTCAGCCCTTTAA	1815	0.4	MDSDYGIPRELSDLQKLRSLYQPELPPCLQGTTVRVEFGDATTTADPSDEPSITHFLRATAKVPDAQIITEHPPIRVGLVFCGRQSPGGHNVIWGLHSALKIHNPYSVLLGFLGGSDGLFAQKTLEITEDILSTYKNQGGYDLLGRTKDQIRTTEQVNAALAACNDLKLDGLVIIGGVTSNTDAAQLAETFAVAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRKASHVALECTLQSHPNMVILGEEVAQSKLTLFEISRKISDAVQARAEQDKYHGVILLPEGLIESIPEVYALLKEIHGLLRQGVDADKISSQLSPWASALFEFLPPFIRRQLLLYPESDDSAQLSQIETEKLLAYLVEVEINKRQKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKNPVNKWKCGAAPISSMMTVKRWSPNPGATSIGKPAIHPAAVDLRGKPYELLRKNATSFLLDDIYRNPGPLQFDGPGADAKPLTLSVEDQDYMGRIKKLQEYLEQVRNIVKPGCPQEVLKAALSVMGSVTEVLTAMSSSSTNLSAL	604

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car04g02759	604	Gene3D	Phosphofructokinase domain	222	535	IPR035966	GO:0003872\|GO:0006096
	Car04g02759	604	PIRSF	PPi_PFK_PfpB	4	558	IPR011183	GO:0005524\|GO:0006096\|GO:0047334
	Car04g02759	604	SUPERFAMILY	Phosphofructokinase	12	545	IPR035966	GO:0003872\|GO:0006096
	Car04g02759	604	PANTHER	PYROPHOSPHATE--FRUCTOSE 6-PHOSPHATE 1-PHOSPHOTRANSFERASE	1	599	-	-
	Car04g02759	604	Pfam	Phosphofructokinase	76	441	IPR000023	GO:0003872\|GO:0006096
	Car04g02759	604	Gene3D	Phosphofructokinase; domain 3	320	384	-	-
	Car04g02759	604	Gene3D	-	18	500	-	-
	Car04g02759	604	PANTHER	PYROPHOSPHATE--FRUCTOSE 6-PHOSPHATE 1-PHOSPHOTRANSFERASE SUBUNIT ALPHA	1	599	-	-
	Car04g02759	604	Hamap	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp].	10	549	IPR011183	GO:0005524\|GO:0006096\|GO:0047334
	Car04g02759	604	TIGRFAM	PFKA_PPi: diphosphate--fructose-6-phosphate 1-phosphotransferase	14	546	IPR011183	GO:0005524\|GO:0006096\|GO:0047334

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Car04g02759	Car-Chr4	53560523	53565676	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car04g02759	K00895		-	gmx:100800863	1119.76

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Car04g02759	04	53560523	53565676	Car04g02759	04	53560523	53565676	ECH