Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02218 atGCCAATTTCACCTGCAGCTGTGATCGTTCCATTGAGTATTCTCTTCTTCGCTTCTGGCCTCATCGTTAACCTCATTCAGGCAATATGCTACGTGATTGTGCGGCCAGTTTCAAAGAATTTGCACAGACGGATCAACCGGTTGGTGGCAGAACTTCTCTGGCTCGAGCTTGTTTGGATCATTGATTGGTGGGCTGGAGTTCAGATCCAAGTATTCACAGATCCTGAAACCTTTCGTTTGATGGGTAAAGAGCATGCTCTTGTCATATCCAATCACAAAAGTGATATTGATTGGCTTGTTGGATGGATTTTAGCTGAGCGTTCAGGTTGCCTTGGAAGCACCCTTGCTGTGATGAAGAAATCATCAAAGTTTCTGCCGGTCATTGGTTGGTCAATGTGGTTTTCTGAATATCTTTTCTTGGAGAGAAATTGGGCCAAGGATGAAAGTACATTAAAGTCAGGCCTACAGCAACTGAGGGATTTCCCTCTTCCCTTTTGGCTGGCTCTCTTTGTAGAAGGAACTCGCTTTACGCAGGCCAAACTATTAGCTGCTCAGGAGTATGCAACCTCAACTGGATTGCCTGTTCCCAGAAACGTTTTGATTCCAAGAACCAAGGGGTTTGTTTCAGCAGTAAGCCATATGCGCTCATTTGTGCCGGCCATTTATGATGTAACAGTGGCAATTCCTAAGAGTTCACCGGCTCCTACAATGCTAAGACTCTTCAGGGGGCAACCTTCAGTGGTGCATGTGCATATTAAGCGGCATTTGATGAAGGATTTGCCAGAATCAGATGAAGCTGTTGCTCAATGGTGTCGAGATATATTTGTGACTAAGGATGCTTTGTTAGACAAACATATCGCCGATGACAAATTCAGTGATCATGAGCCACGGGATCTTGTTCGACCAATAAAGTCTCTTCTGGTTGTCATTACATGGGTTTGTGTGGTTGTCTGGGCGTCTGTTAAGTTGCTTCAATGGTCTTCACTACTATCATCCTGGAAGGGTGTTGCATTTTCAGTATTTGGTCTGGCAATTGTCACTGTACTCATGCAAGTCTTGATTATGTTCTCACAGTCTGAACGTTCAAACCCTGCCAAGGTTTCCCCTTCAAAGCCAAAAAATAGAGAAGAACTGCAGGGTAGTGATGACAAGCAAGAGTAG 1161 0.4453 MPISPAAVIVPLSILFFASGLIVNLIQAICYVIVRPVSKNLHRRINRLVAELLWLELVWIIDWWAGVQIQVFTDPETFRLMGKEHALVISNHKSDIDWLVGWILAERSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLKSGLQQLRDFPLPFWLALFVEGTRFTQAKLLAAQEYATSTGLPVPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMLRLFRGQPSVVHVHIKRHLMKDLPESDEAVAQWCRDIFVTKDALLDKHIADDKFSDHEPRDLVRPIKSLLVVITWVCVVVWASVKLLQWSSLLSSWKGVAFSVFGLAIVTVLMQVLIMFSQSERSNPAKVSPSKPKNREELQGSDDKQE 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02218 386 CDD LPLAT_LCLAT1-like 58 253 - -
Car04g02218 386 Pfam Acyltransferase 80 228 IPR002123 GO:0016746
Car04g02218 386 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 7 376 - -
Car04g02218 386 SMART plsc_2 86 208 IPR002123 GO:0016746
Car04g02218 386 MobiDBLite consensus disorder prediction 370 386 - -
Car04g02218 386 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 52 290 - -
Car04g02218 386 MobiDBLite consensus disorder prediction 360 386 - -
Car04g02218 386 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-LIKE PROTEIN 7 376 - -
Car04g02218 386 Pfam Acyltransferase C-terminus 239 312 IPR032098 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02218 Car-Chr4 31207112 31219570 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02218 6 385 Miscellaneous Gene Families AT3G57650 74.211 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02218 K13523 - gmx:100814107 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02128 03 67513325 67519936 Car04g02218 04 31207112 31219570 PCT