Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02114 ATGGATTCGGAACCAGTTCCATCTTCTAGGGATTTGTTGAAATGTTGCGACTGTGGGTGTAGTTGCTCCTTGCTGGCTAAATATTCTGGGACTTGGATACGGTCTGTTAAACGGAAACACGATGAGTTTAAATTGGATAGCCAATTACCAGCGCCTTCTGTTGCGCGAGTTGAAATCGGCAACGAGTGTGTAGCCTTACGCGAGATGGTCAGCATGCAGCAGAGAACTATTCAAGATTTGAATTCTGAGTTAGATGAGGAGAGAAATTCTTCATCCACGGCTGCTAATGAGGCTATGTCGATGATCTTGAGGTTGCAGAGGGAAAAGGCAGAGATACAAATGGAAGCTCGTCAATTCAAGCGGTTTGCGGAGGAGAAAATGACACACGATCAGGAGGAGCTTATGTCTTTGGAAGATTTGCTGTACAAGAGAGAGCAGATAATTCAGTCACTTACTTGTGAAGTTCAGGCTTACAAGCACAGGATGATGAGTTTTGGGCTCACTGAGGATGAGGTCGAGGGTGATGAATATGACATTCTACCCTACGAATACCCTCCTTTAAAATGTAATGTCATGCATAATGGCATGGATGCTGATAATGACGATACTGATATTGAGAAATACGTATTTGGTGAAACTCCTAGAGACCGTTTGAAGAACTTGGAGAGTAGGATTTCCCAAATGGAGAAAAATCCCAATTACAGCCAGGTGGATGGAGATTTTACAGGAAAAAATGTTCTAGAGAAAGTAATTGTTGGACAATCTCCAAGTTGGACGAGACATTCGAGGAAATTATCCTCTGACTCAGCATCTTTTGGTGGGATGGGGAGAGAAATAGGTCCCGAGTTCCCTATGGAGTCTCCTAAGATCAACAACAACTATAAGAAGGATTATTTCTCTCAGTCAGAGGATCATTCCAATTTGAAGAAGGTAGATAATGCTTCGGAAGGTGATGATATAAGTGATAGAATCTATACAATTGACTCTGTTCATTCGGGAGCACCACATAATGGCTTTACAGGTTACAAAGCTGGAACTGGAGCTTTCGAAGATTGCGGAACCACTCCAAAGGGGTCAGGAAATCATGCTGATTTTGAGGATCCCTACATAAAGAAGCTTTATACGAGGCTTCAGGCACTTGAGGCTGATAGGGAATCAATGAGGCAGGCAATCATATCAATGAGCACAGATAAAGCACAGGTTGTGTTATTGAAGGAAATAGCTCAGCATTTGTGCAAAGAGATGTCACCGCAAAGAAAAATGACTACGAGCAGGCCATATATTGCTGGGAGATCTCCATTCATGTCAATTTTTAAGTGGATCACATCAGTTGTTTTTTGGAGAAAGAGAGCTCATCAAAGCAAGTATACGTTTGGGATCCCAGCTGACAGTATGGGATTGCTGCTACTTATTGACAAAAGAACACATGCAAGGCCAAGGAGATGTATTTCAAGTACACAAGTGGGAGATTAA 1473 0.4236 MDSEPVPSSRDLLKCCDCGCSCSLLAKYSGTWIRSVKRKHDEFKLDSQLPAPSVARVEIGNECVALREMVSMQQRTIQDLNSELDEERNSSSTAANEAMSMILRLQREKAEIQMEARQFKRFAEEKMTHDQEELMSLEDLLYKREQIIQSLTCEVQAYKHRMMSFGLTEDEVEGDEYDILPYEYPPLKCNVMHNGMDADNDDTDIEKYVFGETPRDRLKNLESRISQMEKNPNYSQVDGDFTGKNVLEKVIVGQSPSWTRHSRKLSSDSASFGGMGREIGPEFPMESPKINNNYKKDYFSQSEDHSNLKKVDNASEGDDISDRIYTIDSVHSGAPHNGFTGYKAGTGAFEDCGTTPKGSGNHADFEDPYIKKLYTRLQALEADRESMRQAIISMSTDKAQVVLLKEIAQHLCKEMSPQRKMTTSRPYIAGRSPFMSIFKWITSVVFWRKRAHQSKYTFGIPADSMGLLLLIDKRTHARPRRCISSTQVGD 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02114 490 ProSiteProfiles GTD-binding domain profile. 61 159 IPR007656 -
Car04g02114 490 Pfam Zein-binding 65 155 IPR007656 -
Car04g02114 490 PANTHER BNAANNG28530D PROTEIN 8 465 - -
Car04g02114 490 PANTHER ZEIN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 8 465 - -
Car04g02114 490 Coils Coil 70 140 - -
Car04g02114 490 Coils Coil 370 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02114 Car-Chr4 27458750 27463224 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02114 - - aprc:113872114 810.061
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02114 04 27458750 27463224 Car04g02114 04 27458750 27463224 ECH
Car03g02698 03 72670303 72673146 Car04g02114 04 27458750 27463224 PCT