Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01906 ATGGGCATACTTTACGATGATGTAGTGATTATGAGGCCACCGGAGAAAGAAGGTGATCCAACTGTGATTACTGTTAATTGCCCTGACAAAACTGGTCTTGGTTGTGACTTGTGTCGTATCATACTCTTCTTTCGTCTTAACATTCTTAGAGGAGACGTTTCAACAGATGGAAAGTGGTGCTACATAGTTTTCTGGGTGGTTGGGAAGCAGAAGACGAGGTGGAGTTTGTTGAAGAAGAGGATGGTTGAGGCATGTCCTTCTTGTTCCTCAGCTTCAGGAATCTCTTATTATCGCTCTGATTTGCAGCCACCTAAGCCTCCTGATGTTTTCCTTTTGAAATTTTGCTGTCATGATCGAAAAGGACTATTACACGATGTTACAGCGGTTCTTTGTGAGCTAGAGCTTACTATTACCAAAGTTAAGGTTTCCACTACACCTGATGGCAAAGTCATGGATCTGTTTTTCATCACAGATACCAGGGAACTTCTACATACAAAGAAGAGAAAGGACGATACGATTGAACAGTTAAAAGAAGTTTTGGAGGATTTGATCCTAACTATCGATATTGAATTGGTCGGTCCTGAAATTACTGCTTGCTCACAGGCATCTTCATTCCTTCCAGCTGCAATCACAGACGATGATTTTAATTTGGAGTTGCCTGATTCTGTTCGAAGCGGAACTCTCAGAGCTGATTATGTTTCTATCACTATGGACAACTTGCTTAGTCCGGCTCATACCCTTGTCCAAATTATGTGCCAAGATCACAAAGGTCTTCTTTATGACATCATGAGAACTCTCAAGGACTACAACAATAAGATTTCTTTTGGGCGCTTCACTACAAAACCAAGAAGAAAATGTGAGATAGACTTGTTCATCATGCAAGCAGATGGCAAAAAGATAGTTGACCCTAACAAGCAGAATTCTTTATCATCGCGCTTTAAAGCGGAACTACTTCGTCCACTCAGAGTAGCTGTTGTGAGCAGAGGCCCTGATACTGAGCTTCTTGTAGCAAACCCTGTTGAGTTGTCTGGCAACGGCCGGCCTCTAGTTTTTTATGATATTACTCTTGCTCTCAAAATGCTCGACACTTGCATCTTTTCGGCTGAAATCGGGAGACACGTGATTGGAGACCGCGAGTGGGAGGTTTATAGAATCTTGCTTGATGAAGGGGAAGGGTCATCTGTTCCAAGGAACAAGATTGAGGAGGAAGTTTGGAAGATGCTGATGGGTTGGGAGTAA 1239 0.4262 MGILYDDVVIMRPPEKEGDPTVITVNCPDKTGLGCDLCRIILFFRLNILRGDVSTDGKWCYIVFWVVGKQKTRWSLLKKRMVEACPSCSSASGISYYRSDLQPPKPPDVFLLKFCCHDRKGLLHDVTAVLCELELTITKVKVSTTPDGKVMDLFFITDTRELLHTKKRKDDTIEQLKEVLEDLILTIDIELVGPEITACSQASSFLPAAITDDDFNLELPDSVRSGTLRADYVSITMDNLLSPAHTLVQIMCQDHKGLLYDIMRTLKDYNNKISFGRFTTKPRRKCEIDLFIMQADGKKIVDPNKQNSLSSRFKAELLRPLRVAVVSRGPDTELLVANPVELSGNGRPLVFYDITLALKMLDTCIFSAEIGRHVIGDREWEVYRILLDEGEGSSVPRNKIEEEVWKMLMGWE 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01906 412 ProSiteProfiles ACT domain profile. 111 194 IPR002912 -
Car04g01906 412 Coils Coil 166 186 - -
Car04g01906 412 Gene3D - 108 192 - -
Car04g01906 412 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 2 412 IPR040217 -
Car04g01906 412 SUPERFAMILY ACT-like 107 188 IPR045865 -
Car04g01906 412 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 2 412 - -
Car04g01906 412 SUPERFAMILY ACT-like 18 79 IPR045865 -
Car04g01906 412 Pfam ACT domain 112 167 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01906 Car-Chr4 20908010 20911351 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01906 - - gmx:100816138 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01906 04 20908010 20911351 Car04g01906 04 20908010 20911351 ECH
Car03g02516 03 71067110 71070206 Car04g01906 04 20908010 20911351 PCT