Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01814 ATGCATCTCACAATGCATACCTTCCTTTTCTTCATCGTTCTTCTAATATTCCTCACAACCTCCACGATTGTCGGCTCTACAAACGAGCAACCACCATTGATGTCACCGGCTCCACCCCACAAGGGAGGCCACCACGGTCACCGCCGTCGCAACACAGCGAAATTCTTCGGTTACATTAGAAAAAACCAAACAGCGTATTTGCATAACCAAACAGAATTAGCAAACGAGTTCGTATACGCGCACAATTGGGTGAGAAACGAGTACAAACTGCCAGCATTGACGTGGGATGAGAGTCTGGCGAGTATCGCGCGAAAATATCTTATGGAACGGTACGAGGATTGTAAGTTGGTTCATTCTAACGAAAGTTACGGTGAGAATATGTTTTGGGGAAAGAAATTGCATTGGACACCTTGTGATGCGGTTTATTATTGGTACATGGAAAAAAATTATTATGATTTCAAAACCCTTAAGTGTGAGCCTCCACCAAAGTTTTGTGAACACTTTACGCAAATCGTGTGGAGGGACTCAACGCACGTTGGATGCGCTTTGCAACATTGCCACCTCCCTGAGTCTGGCATGCTCATCGCGTGCGAGTATGACCCACCGGACCAGACTCCGCACCATACCAACCAATCGCGGGAACGGCACTGCCACCGCGACCCGGTCAAGTCAAGTCTCCCAAGAACTTACACACAACGAAATACATCAACTGCCATTTTCTTTCACTTTATCTCACACACTCCCACCATGTCTAGAGTTTCTCTGGCACTTTGCGTATTTTTTGCCTACTTTCCAGGGTTGATGTTATGTGCAGTTGTGTCGCTGAATTCAATTGAGATCTTCCAAAAGCACATGTGGCTAAAAACGACTTCAACTGTGTATTTCCTTTGCAAAGGGGAGAACAAGGCGGTTTTTGAAGATGTCAAGAGACCTCGTGTCTCTTATGCTTTCAATGGTCAACAATCTTGGCAGCTTTTAAGCAACTTTTTGAGTACTAAATGCAAATGGTGTGGACTTTATGAGGAAAACAGCATTACTTCAGATGATGTTTTGGACGAGTGGGAGTTTTGTCCTTCTGATTTTACTGCACCCGATGGTGAATATACTAAGTTCAAGGAAAATCAATTCAATGCTACATTTTTGTGCCGAGATTGCTTATCTCTTGTTGGGGTTTCTAGCTCTTCTGGTGAGCGCAGAAAGCACATAGCAGTTGTAGTTTTTCTTGGTGCTTTGGCCTCAATCATACTAATTCTTGGAGTGGTGCCTGCATATAACTTCTGGTTGAAGAAAAGAAAGGAAGAGGACCAGGTTCGGTTTTTAAAGTTACTGGAAGAAGGAGATGAAAATGAGGATGAGCTAGGCCTTGGTAGTGATATCATAATATGA 1386 0.4387 MHLTMHTFLFFIVLLIFLTTSTIVGSTNEQPPLMSPAPPHKGGHHGHRRRNTAKFFGYIRKNQTAYLHNQTELANEFVYAHNWVRNEYKLPALTWDESLASIARKYLMERYEDCKLVHSNESYGENMFWGKKLHWTPCDAVYYWYMEKNYYDFKTLKCEPPPKFCEHFTQIVWRDSTHVGCALQHCHLPESGMLIACEYDPPDQTPHHTNQSRERHCHRDPVKSSLPRTYTQRNTSTAIFFHFISHTPTMSRVSLALCVFFAYFPGLMLCAVVSLNSIEIFQKHMWLKTTSTVYFLCKGENKAVFEDVKRPRVSYAFNGQQSWQLLSNFLSTKCKWCGLYEENSITSDDVLDEWEFCPSDFTAPDGEYTKFKENQFNATFLCRDCLSLVGVSSSSGERRKHIAVVVFLGALASIILILGVVPAYNFWLKKRKEEDQVRFLKLLEEGDENEDELGLGSDIII 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01814 461 CDD CAP_PR-1 74 202 - -
Car04g01814 461 ProSitePatterns CRISP family signature 1. 166 176 IPR018244 GO:0005576
Car04g01814 461 MobiDBLite consensus disorder prediction 29 48 - -
Car04g01814 461 SUPERFAMILY PR-1-like 47 204 IPR035940 -
Car04g01814 461 PRINTS Allergen V5/Tpx-1 family signature 165 181 IPR001283 -
Car04g01814 461 PRINTS Allergen V5/Tpx-1 family signature 93 111 IPR001283 -
Car04g01814 461 PRINTS Allergen V5/Tpx-1 family signature 140 153 IPR001283 -
Car04g01814 461 PRINTS Allergen V5/Tpx-1 family signature 194 207 IPR001283 -
Car04g01814 461 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 59 201 IPR001283 -
Car04g01814 461 PANTHER CAP, CYSTEINE-RICH SECRETORY PROTEIN, ANTIGEN 5 59 201 - -
Car04g01814 461 Gene3D CAP 67 213 IPR035940 -
Car04g01814 461 Pfam Cysteine-rich secretory protein family 78 188 IPR014044 -
Car04g01814 461 SMART SCP_3 72 207 IPR014044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01814 Car-Chr4 19212305 19218709 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01814 - - cam:101508450 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01814 04 19212305 19218709 Car03g02434 03 70207941 70210681 PCT