Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01756 ATGACAGATTCTCCTTCGAGGCACCGTTCATTAGCAAGAACAGACTCTACACGCTTCTTTCCTTCAAGAGGAGCTATAGGTTTTACTTACGGTTTCACCTTTGCTTCTATCTTGTTTACGCTTTTTCTTGTAAATGCCTTTCACCCTTCACGTAGAAATCATTTTTCTAAAGTTTTTGCTCACATTCTCTCCAACTCTTCATTTTCTCCATCCCCTACTAGTTACACCCCACATACCACCAATGACACCACCACCACTACTCCTAGTAAAACTTCACATCTTAATAAGGATGGTGAGTTACATGATAATAGGTTTGTGAATGCTCATCCTCCCTATCAAATTTCTAGAAAAGAAGGTTCTGGTCTCATAACACCACCAAAGCATAGTAACAATAAAGATGAGTCTTTTGCACCTATGCCTTCACCAAATACTAAAGTGGATTCTCAAAATGTGATGCAAAGTGATCAACATttggtggaattgaggaaaacatgtgatatgtttgaagggtcatgggttttagatgattcatacccactttacaaatctgggtcttgtccacatattgatgaatcttttaactgtttcctcaatggtagaaaagataatatgtatgagaagttcaggtggcagcccaagaattgcaacatgccaaggttcaatggtaaagacatgttggagatactgaggggaaaacgtttagtctttgttggtgattctctcaataggaatatgtgggaatctatggtttgtattcttagtaactcagtggaaaataaaagcaggatttttgaagcctctggtagacaagaatttcggacagaggattcttactcatttatattcacaGATTACAATTGTTCCATTGAGTTCTTCCGTTCCCCCTTTCTTGTTCAAGAGTGGGAGATTCCAGACCGGAAAGGATCGATAAAAGAAACACTTCGTCTTGATTTGGTTGAGAGATCTTGTGATAAGTACAAAAATGCTGATGTTTTGATCTTCAACACAGGTCATTGGTGGACTCATGAGAAAAGAATCGAAGGGAAAGAATACTATCAAGAAGGAAATCATATCCATGGACAACTGAATGTTGAGGAAGCATTTAGTAAAGCTTTGTTTACATGGTCACATTGGGTGGATACTAATATTAATCCTAAGAAAACTATAGTTTTCTTCAGGGGCTATTCCCCTTCTCATTTCAGGGGTGGGGAGTGGTTTTCTGGTGGTCAGTGTGAGAATGAGACAGAACCAATGAAAAATGAGTCTGACTTATCAGAAAATCCTCCAATGATGAAGACCATTGAGTCAGTAATTGAGAGAATGAAGACTCCAGTCTTTTACCTGAACATCACGAAAATGACCGATTTCAGGCTCGATGCTCACCCTTCTATGTACAGAAACATGAATATGTCTGAGGAGAACAAAAAATATATGCTCACACACCAGGATTGTAGTCATTGGTGTCTTCCTGGTGTGCCTGACTTGTGGAATGAATTAGTGTATGCTCGTCTTTTGTATATCATGAAAAGAAACAAGGGCAACCCCCAAACGTAA 1554 0.2979 MTDSPSRHRSLARTDSTRFFPSRGAIGFTYGFTFASILFTLFLVNAFHPSRRNHFSKVFAHILSNSSFSPSPTSYTPHTTNDTTTTTPSKTSHLNKDGELHDNRFVNAHPPYQISRKEGSGLITPPKHSNNKDESFAPMPSPNTKVDSQNVMQSDQHLVELRKTCDMFEGSWVLDDSYPLYKSGSCPHIDESFNCFLNGRKDNMYEKFRWQPKNCNMPRFNGKDMLEILRGKRLVFVGDSLNRNMWESMVCILSNSVENKSRIFEASGRQEFRTEDSYSFIFTDYNCSIEFFRSPFLVQEWEIPDRKGSIKETLRLDLVERSCDKYKNADVLIFNTGHWWTHEKRIEGKEYYQEGNHIHGQLNVEEAFSKALFTWSHWVDTNINPKKTIVFFRGYSPSHFRGGEWFSGGQCENETEPMKNESDLSENPPMMKTIESVIERMKTPVFYLNITKMTDFRLDAHPSMYRNMNMSEENKKYMLTHQDCSHWCLPGVPDLWNELVYARLLYIMKRNKGNPQT 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01756 517 MobiDBLite consensus disorder prediction 69 93 - -
Car04g01756 517 MobiDBLite consensus disorder prediction 116 148 - -
Car04g01756 517 Pfam PMR5 N terminal Domain 163 216 IPR025846 -
Car04g01756 517 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 16 512 IPR029962 GO:0016413
Car04g01756 517 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 16 512 - -
Car04g01756 517 MobiDBLite consensus disorder prediction 69 102 - -
Car04g01756 517 MobiDBLite consensus disorder prediction 124 148 - -
Car04g01756 517 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 217 502 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01756 Car-Chr4 18397807 18400414 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01756 - - ccaj:109815118 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01756 04 18397807 18400414 Car04g01756 04 18397807 18400414 ECH