Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01580 ATGGTATGTGGTGGATCCGTCATGGAACATTCGGATTTAGCGGTTGATTTGCCTCTTTCTGCCATAGCAGAAGCTTTTGAAGAGCTCGCAAAAAAGGTTAATGAAAGGAAGAACGAACAACAACATATTCGGTTGGATATATTTTGCGAAACCGCTTCTCTTGTTTCTATTCTTTTTCGTTGTCTTGGCCTTGCTTTCAAATTTGCTGAAATGGAATACGTTGCGAAGCTACATGGACTAGTGGAAGCATCAAAGACGTGTCAGACTTTACAAGAAATAATTGACCTTGATGTCGCCAATGACACGGTGAAAACATCAGGAAGTTCTTCACGTAACCTACGCAGAGTTCAACAGGGTCTTGATCTCGTTAGAGCTATATTTGAACAACTTTTGTCAACTGATGATATTTCTCTGAAAGGAGTGGCTTCAACAGCTTATGGAGAGGTGTGTGCACCGTATCACACATGGACCGTCAGAACGGCTGTATATGCTGGGATGTATACACTTCCGACGAGAGACCAACTTTTTTTCAAGCTCAATGAAACAGAGCAATCAGCTGAGAAGAAGATGAGGAGGTACATTAGTGCATCACTTCCAGTTATAGAATACATTGATAAACTGTACCTTTCACGAAATATTGTGTTGAACTGGTGA 654 0.4113 MVCGGSVMEHSDLAVDLPLSAIAEAFEELAKKVNERKNEQQHIRLDIFCETASLVSILFRCLGLAFKFAEMEYVAKLHGLVEASKTCQTLQEIIDLDVANDTVKTSGSSSRNLRRVQQGLDLVRAIFEQLLSTDDISLKGVASTAYGEVCAPYHTWTVRTAVYAGMYTLPTRDQLFFKLNETEQSAEKKMRRYISASLPVIEYIDKLYLSRNIVLNW 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01580 217 PANTHER ACD11 HOMOLOG PROTEIN 16 217 - -
Car04g01580 217 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 16 217 - -
Car04g01580 217 Coils Coil 22 42 - -
Car04g01580 217 Gene3D Glycolipid transfer protein 11 217 IPR036497 -
Car04g01580 217 SUPERFAMILY Glycolipid transfer protein, GLTP 37 213 IPR036497 -
Car04g01580 217 Pfam Glycolipid transfer protein (GLTP) 44 180 IPR014830 GO:0005737|GO:0120009|GO:0120013
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01580 Car-Chr4 16312350 16315479 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01580 15 217 Acyl Lipid Metabolism Gene Families AT4G39670 66.505 6.80e-100 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01580 - - aprc:113872428 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01580 04 16312350 16315479 Car04g01580 04 16312350 16315479 ECH