Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01523 ATGCCAGAAATTCAGTTGGGTGTACACACTATCAGATCACATGGAGTTAGAGTCGCAAGGATACATATGCATGACTGGTTGATTCTTTTGCTTCTTGTGCTAATTGATGCTGTCTTGAATATAATAGAGCCATTTCACCGTTTTGTTGGAGTGGGGATGTTGACGGACCTTAGCTACCCACTGAAGGATAACACTATTCCCTTTTGGGCTGTTCCAATAATAGCAATATTGCTGCCACTTGCCGTCTTTCTTGTTTACTATTTCATTCGAAAGGATGTTTATGACTTTCACCACGCCATATTGGGCCTTCTATTTTCTGTACTCATTACTGCGGTGATAACTGATGCTATCAAAGATGGTGTTGGACGGCCACGGCCAGATTTCTTCTGGCGTTGTTTCCCTGATGGAAAGCAGGTGAGTGATCCAGTAACAAGTGATGTTCAATGTACTGGAGATAAAAGTGTTATTAAGGAAGGGCATAAAAGTTTCCCAAGTGGGCATACATCTTGGTCGTTTGCTGGTCTTGTTTTCCTTTCTTGGTATCTATCAGGAAAAGTTAGAGTGTTTGACCGTAGAGGCCACGTTGCAAAGCTCTGTCTTGTTCTCTTACCAGTCCTCACGGCAGCTATGATTGGTGTCTCTCGTGTTGATGATTATTGGCACCATTGGCAAGATGTGTTTGCTGGAGGTCTTATAGGGACGGTAATATCTTCCTTTTGCTACTTACAATTCTTTCCACCTCCATATGACATTGATGGTTGGGGACCTCATGCTTATTTCCAGATGTTAGCTGAATCCCGTAATGGTGCTCAGCCTCCTGTCAACAACAACATTCATCTTGCACAATCTGCAGAGCTTCAGACTGTATCGTTGTATATCCCATCTCAGCATGATGGAGATACACGAGGCAATAGCTGGGATTCGAGCCCCATGTTAGGTGGTGGATCATCACAAAATGCAAGGACACACTGA 972 0.4352 MPEIQLGVHTIRSHGVRVARIHMHDWLILLLLVLIDAVLNIIEPFHRFVGVGMLTDLSYPLKDNTIPFWAVPIIAILLPLAVFLVYYFIRKDVYDFHHAILGLLFSVLITAVITDAIKDGVGRPRPDFFWRCFPDGKQVSDPVTSDVQCTGDKSVIKEGHKSFPSGHTSWSFAGLVFLSWYLSGKVRVFDRRGHVAKLCLVLLPVLTAAMIGVSRVDDYWHHWQDVFAGGLIGTVISSFCYLQFFPPPYDIDGWGPHAYFQMLAESRNGAQPPVNNNIHLAQSAELQTVSLYIPSQHDGDTRGNSWDSSPMLGGGSSQNARTH 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01523 323 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 19 250 - -
Car04g01523 323 MobiDBLite consensus disorder prediction 297 323 - -
Car04g01523 323 CDD PAP2_containing_1_like 55 244 - -
Car04g01523 323 PANTHER LIPID PHOSPHATE PHOSPHATASE 2 1 300 - -
Car04g01523 323 SMART acid_phosph_2 98 241 IPR000326 -
Car04g01523 323 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 21 249 IPR036938 -
Car04g01523 323 Pfam PAP2 superfamily 100 245 IPR000326 -
Car04g01523 323 PANTHER LIPID PHOSPHATE PHOSPHATASE 1 300 IPR043216 GO:0006644
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01523 Car-Chr4 15515418 15521858 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01523 1 289 Lipid Metabolism Gene Families AT1G15080 75.433 2.61e-157 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01523 K18693 - gmx:100805924 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01523 04 15515418 15521858 Car04g01523 04 15515418 15521858 ECH
Car04g01523 04 15515418 15521858 Car03g00072 03 1715439 1718290 ECH