Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01461 ATGGTAGAACCTAAACGGATTTCCGTTCATCACGCTCTCGGCTCTGGCTTAGTTGCTGATGTGTTGCTTTGGAAGAATTGGCGTGGTGGAGTTGCGGTGCTTGGTTCTGCAACCACATTGTGGTATCTTTTTGAACAAGCCGGTTATAATTTTTTGTCGTTTGTGGCTAATGTGATATTGCTTCTCGTCGTGATTCTGTTTTTATGGGCTAAAGCTGCTAATCTTCTTAATAGACCTCTTCCTCCTCTGCCTGATCTGGAGATCTCGGAGGAAACTATTGCCAGGCTTGCTGATGTACTGCAAATTTGGATAAATCGGGCTTTGTCTGTTGCACACGATATAGCAATTGAGAGGAATTTGTTTCTTTGTCTCCAGGTTGTTGGTGTACTGTGGATAATATCTTATATTGGCAGTCTGTTTAACTTCCTGACTTTAATCTATATCTGTGTTCTTCTTAGCTTGTCTCTTCCCATTTTGTATGACAAGTACCAGGATCAAATCAATGAGAAGATGCATGTGATACATGGGATTATTCACCCACAGTATCAAAAGATTCATAGCATTGTTTTGAGCATAATTCCAAAACGTCCAAACAAGGACAAGAAGGTGCAGTAG 615 0.4098 MVEPKRISVHHALGSGLVADVLLWKNWRGGVAVLGSATTLWYLFEQAGYNFLSFVANVILLLVVILFLWAKAANLLNRPLPPLPDLEISEETIARLADVLQIWINRALSVAHDIAIERNLFLCLQVVGVLWIISYIGSLFNFLTLIYICVLLSLSLPILYDKYQDQINEKMHVIHGIIHPQYQKIHSIVLSIIPKRPNKDKKVQ 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01461 204 Pfam Reticulon 18 172 IPR003388 -
Car04g01461 204 PANTHER RETICULON 4 202 IPR045064 GO:0009617
Car04g01461 204 ProSiteProfiles Reticulon domain profile. 18 204 IPR003388 -
Car04g01461 204 PANTHER RETICULON-LIKE PROTEIN B11 4 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01461 Car-Chr4 14824198 14827201 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01461 K20723 - gmx:100527029 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01461 04 14824198 14827201 Car04g01461 04 14824198 14827201 ECH