Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01456 ATGGCTTCACAAAACAAAAAAACCAAACAAGAAATTCATGTTCTGTTAGTAGCGTTTTCAGCTCAAGGCCACTTAAACCCTTTACTTAGACTAGGCAAATCTCTATTAACCAAAGGCTTAAACGTAACACTCGCCACCACTGAATTAGTTTACCACCGTGTCTTCAAACCTTCCTCCACTACTTCCACCACCGTCCCCACTACTTTCACCACCAACGGAATCAACATCCTGTTTTTCTCCGATGGCTTCGATATCAGCCAAGGTCAAAAAAAGGTTGATGATTACATGGAACTTATTGCAAAATTTGGACCCATTAGTCTCACAAATCTCATCAAAAACAATTTCATCAATAGTTCAAAAAAACTAGCTTGTATTATCAATAACCCTTTTGTTCCTTGGGTAACAAAAGTTGCTTCTGAATTCAATATCCCTTGTGCTTGTCTTTGGATTCAACCTTGTACTCTTTACTCAATCTACTATCGTTTCTACAACAATTTCAACAATTTTCCAACACTTGAAAACCCCGAAATCGATGTTGAATTACCCGGTCTTCCATTGTTGAAACCACAAGATCTTCCATCTTTTATTCTCCCAAAAAACACTTATGAAACTTTACCAAAAGTACTACAAGAAATGTTCCAAAACATGAAATCTCTGAAATGGGTATTGGCGAATTCTTTTGAAGAATTGGAAAAAGATGTCATTTTTTCAATGAATGATATTTTTCCAATCAAAGCCGTTGGCCCATTAGTCCCTTATTCGTTACTCGGTCGAGACGAAGAAGAAGACGTCGGAATAGAAATGTGGAAGCCACAAGATTCTTGCATTGAATGGCTTAACAAAAAGCCACCATCTTCAGTTATTTATATTTCATTCGGAAGTCTAATTTTTTTATCTGAAAAACAAATCGAAAGCATAGCAAAAGCCTTGAAAAACAGCGAAAGCAATTTTCTTTGGGTGATTAAAAATAAAGAAGGAGGAGCTATAACAGCAGGGACACCAATGATTGGTTATCCACAATGGACAGATCAACCTACGAATGCGAAACTTGTGGCTGATGTTTTTGGAATGGGGATTCGATTGAAACAGGATAGTGATGGGTTTGTTGAAAGTGAGGAAGTTGAAAGAGCTATTAGAGAAATGGTTGGGAGTGAAATGTTTAAGAAAAATGCTTTGGAGCTTAAACGGAAGGCGAGGGAAGCGGTGGCTCATGCTGGTTCTTCTGATACGAATATTCAATCATTTGTTGATGAAATTCTTGCTTCTGTAATGGATCATCATTGA 1284 0.3731 MASQNKKTKQEIHVLLVAFSAQGHLNPLLRLGKSLLTKGLNVTLATTELVYHRVFKPSSTTSTTVPTTFTTNGINILFFSDGFDISQGQKKVDDYMELIAKFGPISLTNLIKNNFINSSKKLACIINNPFVPWVTKVASEFNIPCACLWIQPCTLYSIYYRFYNNFNNFPTLENPEIDVELPGLPLLKPQDLPSFILPKNTYETLPKVLQEMFQNMKSLKWVLANSFEELEKDVIFSMNDIFPIKAVGPLVPYSLLGRDEEEDVGIEMWKPQDSCIEWLNKKPPSSVIYISFGSLIFLSEKQIESIAKALKNSESNFLWVIKNKEGGAITAGTPMIGYPQWTDQPTNAKLVADVFGMGIRLKQDSDGFVESEEVERAIREMVGSEMFKKNALELKRKAREAVAHAGSSDTNIQSFVDEILASVMDHH 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01456 427 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 328 396 IPR002213 GO:0008194
Car04g01456 427 Gene3D Glycogen Phosphorylase B; 272 327 - -
Car04g01456 427 PANTHER GLYCOSYLTRANSFERASE-RELATED 11 325 - -
Car04g01456 427 Gene3D Glycogen Phosphorylase B; 328 400 - -
Car04g01456 427 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 328 422 - -
Car04g01456 427 Gene3D Glycogen Phosphorylase B; 1 270 - -
Car04g01456 427 Gene3D Glycogen Phosphorylase B; 401 412 - -
Car04g01456 427 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 11 325 - -
Car04g01456 427 CDD GT1_Gtf-like 13 408 IPR002213 GO:0008194
Car04g01456 427 PANTHER GLYCOSYLTRANSFERASE-RELATED 328 422 - -
Car04g01456 427 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01456 Car-Chr4 14786012 14787497 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01456 10 419 Glycosyltransferase AT2G23260 39.355 1.22e-102 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01456 K13692 - gmx:100778995 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01456 04 14786012 14787497 Car04g01456 04 14786012 14787497 ECH