Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01436 ATGGATATCTCACAAAGAGGTTTGGCATGCCAAGTTTTGACACTGAGGTCATCACGTCTCCGAAAGTTGAGCTTGATAGGGGAGTTCATGCATATGCACACACTTAATCTTGATTTCAGTTCTTCCCTTACTAGTTTCCAAGAAGACTGTTTTAATTGCATGCCCAATCTAATGTGTCTCTCAATGTGTGAAACACGGATTACAAATCTTTGGACAACTGTTGCGGCTCTCTCTAAGCTCCCTTCTTTAGTTGAACTAAGGTTTCAATTTTGGCAGTATTGCAATGATGCTGGAACATCTTTTACCTCATCAAGTGGGAAGTCAGATGCTACTGCTGATTTTAGTCTGCTTGATAGAGTTCCTTTTATTGGTGAATCTTGCATTGATACAAGGGAACTGACAAATTCCAACTTTAGCTTCGAGGATCCAATTAGAAATTTTTATTCCTTTGATGAAGAAATTATGAGTGATGATGTTCAAAGCATGGTTGAGGACTTGTCAAATGATAGTGAAATTGACTTGCCTAATCATCATGATAGAAACTGGTTGTCAGATGTTTTTCCTAGGTGGAATTTACAAATGCCTCTTCAGAGTGAGAATGAAGAAGAAGAGTCATCACGAGGTTCCTTTACAGGGAATACTGTTGATGTTTCTATGAAATATATGTCTTGTCATGCATCACCAATATGTCAGGAGAAACACTACAGAGAATTCATGATAGCTTCATTACCGAATCTGAAAAGTCTAGATAATCTGCCTATCAGAAAGATTGACAAGGAAAGGGCTACTGGAATATTTTCTCAATACTTTGAATATCTTCCATACAGATGGAAGAGCAAAGAGAGTGTTTTAAGTATCATACACAAGCGAGAAATAAAATCAGGTCGCATTAAGGTGCAATCTTCTAAGCGTAGCCCGTCGTATCCTTCTGGAACGTCTCAGTATTTTTATACTAGGTCTCTTTCAGCTGCTAAATTGGGGTCTTCAACTTGGCCTTTCTTACATCCACTTTCTATACCAGGATTTGAATTGGAGAAGGGCTTTCGTGATAAGGGCTTTCATCCAAGGCAGTTTGAGTATCACCCATCTGACTCCAGCTTGATGGTCTTTGGAACTTTAGATGGTGAAGTAGTTGTCATAAATCATGAAAGTGAACACATTGTTAGTTATATCCCATCACTTGGAGCAATGAATAGCGTCTTGGGTCTTTGTTGGCTCAAGAAATATCCTTCTAAGCTTATAGCAGGTTCAGATAATGGTTCCCTGAAATTGTTTGACATCAACCGTATACCAAGAAAAATGACTGGCTTATATGGGAACTCTGGTTGTGTTACTTTTGATGAATTTGACCAGTTGACATCTGTTCATGTTAACTCTATGGATGAACTATTTATTGCAAGTGGTTACTCAAGAAATGTTGCTTTGTATGACATTAACAGTGGAAAGCGCTTACAAGTGTTCACAGATATGCATCGTGGGCATATTAATGTCGTCAAATTTGCAAATCATTCCCCATCAATTTTTGCTACTTCATCATTTGATCATGATGTCAAGATGTGGGACTTGAGACAGAAACCAATACACCCTTGCTTCACTGCATCAAGCTCTAGAGGAAATGTGATGGTTTGCTTTTCTCCAGATGACCAATATATTTTAGCATCAGCAGTTGATAATGAGGTCAGACAATTCCTGGCTGTTGATGGTAGGCTTCACTTAGTTTTTGATATAGCTCCAACTGAAAGTTCTCAAAATTACACTCGTTCTTACTACATGAATGGGAGGGACTACATTATAAGTGGAAGTTGTGATGAGCACGTTGTCCGTATTTGCTGTGCTCAAACAGGGAGGCGCCTGAGAGATATTTCCTTGGAGGGTAAAAGCTTAGGAAGCTCCATGTTTGTTCAATCTTTGAGAGGCGATCCTTTCAGGGATTTCAGTATGAGTGTGTTAGCAGCCTACATGCGGTCTGGCTCCAGGTCTGAAATTGTCAAGGTCAACTTACTAGCATCTAGTGGCCATGTTAAGGATGACCATCCCCTATGCTCGTCCTACATTATGGGAGCTTGA 2067 0.3953 MDISQRGLACQVLTLRSSRLRKLSLIGEFMHMHTLNLDFSSSLTSFQEDCFNCMPNLMCLSMCETRITNLWTTVAALSKLPSLVELRFQFWQYCNDAGTSFTSSSGKSDATADFSLLDRVPFIGESCIDTRELTNSNFSFEDPIRNFYSFDEEIMSDDVQSMVEDLSNDSEIDLPNHHDRNWLSDVFPRWNLQMPLQSENEEEESSRGSFTGNTVDVSMKYMSCHASPICQEKHYREFMIASLPNLKSLDNLPIRKIDKERATGIFSQYFEYLPYRWKSKESVLSIIHKREIKSGRIKVQSSKRSPSYPSGTSQYFYTRSLSAAKLGSSTWPFLHPLSIPGFELEKGFRDKGFHPRQFEYHPSDSSLMVFGTLDGEVVVINHESEHIVSYIPSLGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLFDINRIPRKMTGLYGNSGCVTFDEFDQLTSVHVNSMDELFIASGYSRNVALYDINSGKRLQVFTDMHRGHINVVKFANHSPSIFATSSFDHDVKMWDLRQKPIHPCFTASSSRGNVMVCFSPDDQYILASAVDNEVRQFLAVDGRLHLVFDIAPTESSQNYTRSYYMNGRDYIISGSCDEHVVRICCAQTGRRLRDISLEGKSLGSSMFVQSLRGDPFRDFSMSVLAAYMRSGSRSEIVKVNLLASSGHVKDDHPLCSSYIMGA 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01436 688 Pfam WD domain, G-beta repeat 492 521 IPR001680 GO:0005515
Car04g01436 688 SUPERFAMILY WD40 repeat-like 352 621 IPR036322 GO:0005515
Car04g01436 688 Gene3D Ribonuclease Inhibitor 209 271 IPR032675 -
Car04g01436 688 SMART LRRcap_2 232 250 IPR003603 -
Car04g01436 688 Gene3D Ribonuclease Inhibitor 4 116 IPR032675 -
Car04g01436 688 SMART WD40_4 439 477 IPR001680 GO:0005515
Car04g01436 688 SMART WD40_4 384 426 IPR001680 GO:0005515
Car04g01436 688 SMART WD40_4 480 521 IPR001680 GO:0005515
Car04g01436 688 SMART WD40_4 526 564 IPR001680 GO:0005515
Car04g01436 688 Gene3D - 354 640 IPR015943 GO:0005515
Car04g01436 688 SUPERFAMILY L domain-like 11 96 - -
Car04g01436 688 PANTHER BNAC09G30780D PROTEIN 2 676 IPR046377 GO:0071493|GO:0080008
Car04g01436 688 ProSiteProfiles Trp-Asp (WD) repeats profile. 488 523 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01436 407 570 Miscellaneous Gene Families AT5G08390 26.220 1.40e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01436 - - gmx:100806443 1138.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01436 04 14637372 14645595 Car04g01436 04 14637372 14645595 ECH