Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01424 ATGAAGTTTATGAAACTTGGTTCCAAGCCAGATACTTTTCAAACTGATGGAAACAATGTTAGGTATGTGGCCAGTGAGTTGGCATCAGATATCATTGTTAGCTTAGGGGATATGAAGTTTTACTTACACAAGTTTCCTCTCATTTCGAAGAGTTCTCACTTACAGAAGTTGATCTCCCTCAGTAACGAAGAAAACATTGACGAAATCCAAATATCTGACATTCCCGGTGGCGCAAGTGCCTTTGAGATATGTGCTAAGTTTTGCTATGGCATGACTGTTACCCTCAATGCATACAATGTGATTGCTACTAGATGTGCAGCAGAGTACCTTGAAATGCACGAAACCATCGAGAAAGGAAACCTTCTTTATAAGATTGATGTTTTCCTTAGCTCTAGCATTTTTCGTGGTTGGAAGGATTCGATCATCCTTCTTCAAACTACAAAGTCAATGTTATCCATGAATGAGGAGCAAAAGGTGGTCAATCATTGCATTGAATCTATAGCAAACAAAGCGTGTGTTGATGTATCCAACGTTGACTGGTCGTACACTTATAATCGAAAAAAGCTTCCAGAGGAAAACGGGGGAGAGTTGAAACAGAATGGAGTCAGAACTCGAAATGTTCCAAAAGACTGGTGGGTTGAAGACTTATGTGAGCTTGAAGTTGACATGTACAAATCTGTGATTACAAGTATCAAAATCAAGGAACTTCAATCTAATGATGTAATCGGTGAAGCCTTGAAAGCCTATGCTTATAGAAGGTTGCCAAATTTCAGCAAGGGTATGATACCATGTGGGGATGTGTCGAAGCATCGGTTAATAGTTGAAACTATCGTGAAGTTGTTGCCTTCCGAGAAAGGCAGCGTATCGTGTAGGTTCTTAGTCAAGTTATTGAAAGCTGCCATTTTTGTAGAATCAGAAGATAGGATTAAAGAAGAACTAGTGAAGAGAATTGGACAGCAACTGGAGGAGGCTTCTGTAACCGATATTTTGATTCGAGCACCAGACGGGGAGATTACAATGTATGATGTCGGTATAGTACAGAAAATCGTAAGGGAGTTTATTATAAAAGACCACAATTCTGAGATTGAATCGGTTGGAGGTGGTGAAAAGCCAGGGATTTTATCAGATGCTTCTAAGCTAATGGTTGCAAAACTCATTGATGGATATCTTGCTGAAATCGCGAAGGATCCTAATTTACCATTGTTGGATTTCGTTAATCTTGCTGAGTTAGTGTCCAACATTTCGCGTCCTGCTCATGACGGTCTTTACAGGGCTATTGACACTTATTTGAAGGAGCACCCTGCGATCAGCAAAGGCGAAAAGAAGAGAATATGCAAGTTGATGGATTGCAGAAAGCTATCCGTCGATGCATGCTTACATGCAGTGCAAAACGAGAGGCTACCGTTGCGAGTAGTTGTGCAGGTACTATATTTCGAGCAAGTCAGAACAGCTGCATCATCAGGTACTAGCACTCCCGACATAGCTAAAGGAATCAAAGACATGAGCAACGGATCCAACGGTAGCTCGAGGTCCGGAACAACCAATCCGGAAGAAGACGCGGACGGTGTGGCCACGGCCGAGGAACTAAAGGCGTTAAGAAAGGAACTTGCAACACTAAGACTAAGTAATGGAGAAGCTAAACCTAGCATGGACAAGGCTGTAATTGGGAAAATGAAAGGGTTACTCAGGTCAAAGAAATCATTCATAAAACTATGGGCAAGTAAAGGTGGACAAGGAGAAAATAGTGGTTCAGATTCATCTGAGAGTGTTGTTTCTGCTAATCCTGAAGAAGTTAAATCTACACCATCAAGAAATAGGAGGCATTCAGTTTCCTAA 1836 0.4134 MKFMKLGSKPDTFQTDGNNVRYVASELASDIIVSLGDMKFYLHKFPLISKSSHLQKLISLSNEENIDEIQISDIPGGASAFEICAKFCYGMTVTLNAYNVIATRCAAEYLEMHETIEKGNLLYKIDVFLSSSIFRGWKDSIILLQTTKSMLSMNEEQKVVNHCIESIANKACVDVSNVDWSYTYNRKKLPEENGGELKQNGVRTRNVPKDWWVEDLCELEVDMYKSVITSIKIKELQSNDVIGEALKAYAYRRLPNFSKGMIPCGDVSKHRLIVETIVKLLPSEKGSVSCRFLVKLLKAAIFVESEDRIKEELVKRIGQQLEEASVTDILIRAPDGEITMYDVGIVQKIVREFIIKDHNSEIESVGGGEKPGILSDASKLMVAKLIDGYLAEIAKDPNLPLLDFVNLAELVSNISRPAHDGLYRAIDTYLKEHPAISKGEKKRICKLMDCRKLSVDACLHAVQNERLPLRVVVQVLYFEQVRTAASSGTSTPDIAKGIKDMSNGSNGSSRSGTTNPEEDADGVATAEELKALRKELATLRLSNGEAKPSMDKAVIGKMKGLLRSKKSFIKLWASKGGQGENSGSDSSESVVSANPEEVKSTPSRNRRHSVS 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01424 611 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Car04g01424 611 MobiDBLite consensus disorder prediction 487 521 - -
Car04g01424 611 MobiDBLite consensus disorder prediction 577 599 - -
Car04g01424 611 SUPERFAMILY POZ domain 21 117 IPR011333 -
Car04g01424 611 MobiDBLite consensus disorder prediction 574 611 - -
Car04g01424 611 ProSiteProfiles NPH3 domain profile. 210 482 IPR027356 -
Car04g01424 611 Pfam NPH3 family 210 458 IPR027356 -
Car04g01424 611 CDD BTB_POZ_NPY3-like 20 124 - -
Car04g01424 611 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY2 1 608 IPR029960 GO:0009958
Car04g01424 611 PANTHER OS12G0117600 PROTEIN 1 608 IPR043454 -
Car04g01424 611 SMART BTB_4 29 127 IPR000210 GO:0005515
Car04g01424 611 MobiDBLite consensus disorder prediction 501 518 - -
Car04g01424 611 Pfam BTB/POZ domain 26 118 IPR000210 GO:0005515
Car04g01424 611 Gene3D Potassium Channel Kv1.1; Chain A 9 121 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01424 Car-Chr4 14505370 14509634 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01424 8 488 EF-hand Containing Proteins AT3G44820 35.317 6.06e-100 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01424 - - gmx:100807318 1017.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01424 04 14505370 14509634 Car04g01424 04 14505370 14509634 ECH