Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01415 ATGAGACTTGGCTTCTTTGATAACCCAAAATCACTTCCATTTGAAAACCTTGGTCCATCTGATGCATGCACTAAAGAAAATCAGCAATTGGCTCTAGAAGCTGCAAAGCAAGGAAAAGTTTTGCTAGAAAACAATGGAGCTCTTCCTTTATCAAAGACTAAGATAGAAAAATTTGGCTTTGTTTGGACCAAATGCAAATGCCACCACAGTTATGATTACGACGTTAAATGCAGTAATCAGAACCTTTTTGCAGCAGCCTCTGCTGATGCAGTTGTGTTGGTTGTGGGAATAGATCAATCTATAGAAGCAGAAGGGCTGGGTAGAGTGAATTTGACATTACCTGGATTTCAAGAGAAGCTTGTGAAAGATCATAGGGGGATATTGTGGGTTGGTTATCCTGGTCAAGATGGAGGAAATGCCTTAGCACAAGTAATTTTTGGAGACTATAATCCAGGTGGTAGGTTCCCTTTTACATGGTATCCACCATCTTATGTTGACCAAGTTCCAATGAGAGACATGATGGAAACTCCCTGGAAGAACATACATACATGA 552 0.4022 MRLGFFDNPKSLPFENLGPSDACTKENQQLALEAAKQGKVLLENNGALPLSKTKIEKFGFVWTKCKCHHSYDYDVKCSNQNLFAAASADAVVLVVGIDQSIEAEGLGRVNLTLPGFQEKLVKDHRGILWVGYPGQDGGNALAQVIFGDYNPGGRFPFTWYPPSYVDQVPMRDMMETPWKNIHT 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01415 183 Gene3D - 125 183 IPR036881 GO:0004553|GO:0005975
Car04g01415 183 PANTHER BETA-D-XYLOSIDASE 5-RELATED 76 123 - -
Car04g01415 183 PANTHER BETA-D-XYLOSIDASE 5-RELATED 1 60 - -
Car04g01415 183 PANTHER SUGAR HYDROLASE-RELATED 1 60 IPR044993 GO:0009044|GO:0045493
Car04g01415 183 PANTHER SUGAR HYDROLASE-RELATED 76 123 IPR044993 GO:0009044|GO:0045493
Car04g01415 183 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 40 168 IPR036881 GO:0004553|GO:0005975
Car04g01415 183 Gene3D - 24 124 IPR036881 GO:0004553|GO:0005975
Car04g01415 183 PANTHER BETA-D-XYLOSIDASE 5-RELATED 125 174 - -
Car04g01415 183 PANTHER SUGAR HYDROLASE-RELATED 125 174 IPR044993 GO:0009044|GO:0045493
Car04g01415 183 Pfam Glycosyl hydrolase family 3 C-terminal domain 125 161 IPR002772 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01415 Car-Chr4 14426253 14427628 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01415 1 177 Glycoside Hydrolase AT3G19620 47.325 1.88e-61 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01415 K15920 - cam:101499484 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01415 04 14426253 14427628 Car04g01415 04 14426253 14427628 ECH