Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01412 ATGTGCATTGTATTAAGGGAAGTTTTATATAATACAATGATGATTAGTGACAAAATGAAGGTAGCTACAGAATTCTGCAATTTGTTGTTCACCACCACCTCTGTCATTTTACTTTTCTCAGGCCTTGGTGTTGATTCTATGGCATATGATTATTTTTCTACTACAGAGTGTATGAGAGAACCTCAGAGGGCACAATATGGAGGGGGCATTATAGTAAATCCAGGATTTGATCACAACATAGAGAGTTGGACAGTGTTTGGAAATGGAACAATAGAGGAACGTATATCAAATGATGGAAATAGATTCATTGTTGCTAGAAACAGAACACAATCATTGGATAGTTTTTCTCAAAAGATCCAACTCAAGAAAGGATTGATATACGTATTTTCTGGTTGGTTTCAGCTGAGTGAAGGAAGTGACACAGTTTCTGTTGTATTTAAATTAAATGGAAGTGAAATGGTAAAGGGTGGCCATGTGATTGCAAAGAATGGATGTTGGTCTTTTCTAAAAGGTGGCGTAGTCGCAAATTTCTCAAGTTCTGCTCAGATTCATTTCGAGAGCAATAATCCAAATGTGGAAATATGGGGTGATAGTGTGTCCTTGCAACCATTTACCAAAAAGCAATGGAGATCACACCAAGACAACAGCATTGAAAGGGTACGTAAGAGCAGGGTGAGATTCCATGTAACTAATGTAAACAAAACATCGTTGGAAGGAGCAAAAATTGTGATAAAACCAACAAAACCAAATTTTCCATTTGGATGTGGAATGAACCATAATATCCTGAACAACACTGAGTACCAAAAATGGTTTGTGTCAAGATTCAAATACACAACATTCACAAATGAAATGAAATGGTATAGTACAGAGAAAATCCAAGGCATTGAAAACTATACTATAGCAGATGCCATGGTGGAATTTAACAGAAGAAATGGAATTTCTGTTAGAGGTCACACAATTTTTTGGGATGATATGAAATTTAATCCTGTATGGGTTAAGACTTTATCTCCCAGAGGATTGCGAAAAGCCGCAGCGAAAAGAATAAATTCAATTGTTTTAAGATATAAAGGAAAAGTGATTGCTTGGGATGTGATGAATGAAAATGTTCATTATCGGTTTTTTGAAGACAAACTTGGTGAAAATGCTTCTGCAATATACTATTCAAAAGCTCATGAGCTTGATCCAACAGTACCAATGTTCATGAATGAGTTTAACACTATTGCATATAGTGGAGAGAAGATTGCTAGTCCAGCAAATTATGTTAAGAAACTTAAGGAGATTATGGAATTTCCAGGAAATGATAGAATACCATTTGCTATTGGACTACAAGGTCATTTTAGTCAAGGTCAGCCAAATCTTGCATACATGAGGTCAAGTTTAGATTTTCTTGGTGCTACTGGACTTCCTATTTGGCTCACAGAGACTAGTATGGATCCTCAGCCACAACAGGCAGAGTACTTTGAAGAGGTACTAAGAGAAGCTTACTCTCATCCAGCTGTAAAAGGGATTATAATGTTTGCTGGTCCAGCACAAGCTGGTTTCTTAGGTACACTTCTAGCAGATCAAAATTTCACAATCACTCCAACTGGTCAAGTTGTGGACAACTTGATTCATGAATGGGGAACAGGGCCAACTCATACACTTATATCAGATACTACAGGAATTGTAGATATTTCATTAAATCATGGAGATTATGATGTAACTGTTACACATCCTGTAACACAATACATCCAAAATTTGAATCTAAGTGTAAACAAAGGACTTTCACATCAAAATATTCATGTCAAAGTCCATGCCTAA 1800 0.3628 MCIVLREVLYNTMMISDKMKVATEFCNLLFTTTSVILLFSGLGVDSMAYDYFSTTECMREPQRAQYGGGIIVNPGFDHNIESWTVFGNGTIEERISNDGNRFIVARNRTQSLDSFSQKIQLKKGLIYVFSGWFQLSEGSDTVSVVFKLNGSEMVKGGHVIAKNGCWSFLKGGVVANFSSSAQIHFESNNPNVEIWGDSVSLQPFTKKQWRSHQDNSIERVRKSRVRFHVTNVNKTSLEGAKIVIKPTKPNFPFGCGMNHNILNNTEYQKWFVSRFKYTTFTNEMKWYSTEKIQGIENYTIADAMVEFNRRNGISVRGHTIFWDDMKFNPVWVKTLSPRGLRKAAAKRINSIVLRYKGKVIAWDVMNENVHYRFFEDKLGENASAIYYSKAHELDPTVPMFMNEFNTIAYSGEKIASPANYVKKLKEIMEFPGNDRIPFAIGLQGHFSQGQPNLAYMRSSLDFLGATGLPIWLTETSMDPQPQQAEYFEEVLREAYSHPAVKGIIMFAGPAQAGFLGTLLADQNFTITPTGQVVDNLIHEWGTGPTHTLISDTTGIVDISLNHGDYDVTVTHPVTQYIQNLNLSVNKGLSHQNIHVKVHA 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01412 599 SUPERFAMILY (Trans)glycosidases 238 544 IPR017853 -
Car04g01412 599 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS, PUTATIVE-RELATED 55 589 - -
Car04g01412 599 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 238 536 IPR001000 GO:0004553|GO:0005975
Car04g01412 599 Pfam Carbohydrate binding domain 69 151 IPR003305 GO:0016798
Car04g01412 599 Gene3D Glycosidases 243 542 - -
Car04g01412 599 Pfam Glycosyl hydrolase family 10 248 503 IPR001000 GO:0004553|GO:0005975
Car04g01412 599 Gene3D - 58 204 - -
Car04g01412 599 SUPERFAMILY Galactose-binding domain-like 67 203 IPR008979 -
Car04g01412 599 PANTHER GLYCOSYL HYDROLASE 55 589 IPR044846 GO:0004553|GO:0005975
Car04g01412 599 SMART glyco_10 284 537 IPR001000 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01412 Car-Chr4 14400724 14404220 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01412 46 584 Glycoside Hydrolase AT4G33840 48.614 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01412 - - mtr:MTR_1g106770 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01412 04 14400724 14404220 Car04g01412 04 14400724 14404220 ECH