Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01411 ATGAAGTTTGCTACTGAACTATGCATTTTGTTGTTCACCACATCTTTCTTTCTCCTCATTTCAGGGCTTGAAGTCAATTCTATTTCTTATGATTATTCTGCTACTATTCAGTGTATGAGAAAACCTCAGAGAGCACAATATGGAGGGGGCATTATAGTAAATCCAGGATTTGATCATAACATAGAGGGTTGGAGAGTGTTTGGAAATGGAACAATCGAAGAACGAGTATCGAGTGATGGCAATAGATTCCTTGTTGCTAGCAATAGAACACAACCATTGGATGGTTTCTCACAGAAGGTCCAATTGAAGAGAGGAATGATATACACCTTTTCAGGTTGGTTTCAGCTTAGTGAAGGCAGTGACATCGTGTCAGTTGTATTTAAAAGAAATGGAGATGAACTGGTAAGAGGTGGTCATGTGATAGCTAAGCGTGGTTGCTGGTCTCTGCTAAAAGGCGGCATAGTTGCAAATTTTTCAAGCCCTGTTGAGATTCTTTTTGAGAGTGAGAATCCAACAGTGGAATTATGGGCTGATAGTTTCTCCTTACAACCATTCACCAGAAAGCAATGGAGATCACACCAAGACGACGGTGTTGAGAGGGTACGTAAAAGCCGGGTGAGATTCCATGTAACTCATCCAAACAAAACAGCGTTGGAAGGAGCAACAGTTGTGATCAAACAAACAAAGGCAGATTTCCCATTTGGATGTGCAATGAATCGTCATATCCTCACAAACAATGAGTACCAGAAATGGTTTGTGTCAAGATTCAAATACACAACTTTCACCAATGAGATGAAGTGGTATAGTACAGAGAAAATTCCAGGCCAGGAAAACTATACTATCTCAGACGCCATGCTGAAACTCGCCAAAGATAACGGCATTTCTGTCAGAGGTCATAACATTTTATGGGACAATGGAAATCGTCAGCCTCAATGGGTTAAGTCCCTATCTCCGGACAAATTACGAGAAGTGGCTGATATAAGAATGAATTCTGTGGTTTCAAGGTATAAAGGACAACTGATTGCATGGGATGTGGTCAATGAGAATGTCCACTTCCACTTTTTTGAGGATAAACTCGGCTCAAATGCATCTGGAGTATATTATTCAAAGGCTTACCAACTTGATCCGAAAACCAACATGTTCATGAATGAGTATAACACCATTGAATACAGTGGAGATAAAGGTGCTAGCCCAACCAATTTTATCAGGAAACTCAAGAAGATTCAGCAATTTCCAGGAACTGATGGAATATCATTGGCCATAGGGTTGCAAAGTCATTTTGCAAGTGGCCAGCCGAACATTGCTTACATGAGGTCAGGTCTAGATCTTCTTGGTGCAACTGGACTTCCTATATGGCTCACGGAAGCCAGCATGGATCCTCACCCAAAACAGGCAGAGTATTTTGAAGAGATACTAAGAGAGGGTTACTCTCATCCTGCTGTTCAAGGGATCATAATGTTTGTTGGTCCAGAACAAGCCGGTTTCAACAGTACACTCCTTGCGGATGCAGATTTTCAAAATACCCCAACTGGAGACATTGTGGACAAGCTGATTCATGAGTGGGAAACTGGGCCTCAAACAGCCATAGCAGATAGTAGAGGAATTGTAGATATTTCACTACGTCATGGGGATTATGAAGTGACTGCCACACACCCTCTAACCAAATGCTCCAAAACTATGAAAATAAGTGCAAGGAAAGGATTTTCAATGGAAACCATTCATGTGAAAATGCATGCCTGA 1740 0.4138 MKFATELCILLFTTSFFLLISGLEVNSISYDYSATIQCMRKPQRAQYGGGIIVNPGFDHNIEGWRVFGNGTIEERVSSDGNRFLVASNRTQPLDGFSQKVQLKRGMIYTFSGWFQLSEGSDIVSVVFKRNGDELVRGGHVIAKRGCWSLLKGGIVANFSSPVEILFESENPTVELWADSFSLQPFTRKQWRSHQDDGVERVRKSRVRFHVTHPNKTALEGATVVIKQTKADFPFGCAMNRHILTNNEYQKWFVSRFKYTTFTNEMKWYSTEKIPGQENYTISDAMLKLAKDNGISVRGHNILWDNGNRQPQWVKSLSPDKLREVADIRMNSVVSRYKGQLIAWDVVNENVHFHFFEDKLGSNASGVYYSKAYQLDPKTNMFMNEYNTIEYSGDKGASPTNFIRKLKKIQQFPGTDGISLAIGLQSHFASGQPNIAYMRSGLDLLGATGLPIWLTEASMDPHPKQAEYFEEILREGYSHPAVQGIIMFVGPEQAGFNSTLLADADFQNTPTGDIVDKLIHEWETGPQTAIADSRGIVDISLRHGDYEVTATHPLTKCSKTMKISARKGFSMETIHVKMHA 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01411 579 SUPERFAMILY (Trans)glycosidases 218 524 IPR017853 -
Car04g01411 579 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 219 517 IPR001000 GO:0004553|GO:0005975
Car04g01411 579 SMART glyco_10 265 517 IPR001000 GO:0004553|GO:0005975
Car04g01411 579 Gene3D Glycosidases 221 526 - -
Car04g01411 579 SUPERFAMILY Galactose-binding domain-like 48 183 IPR008979 -
Car04g01411 579 Gene3D - 39 185 - -
Car04g01411 579 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS, PUTATIVE-RELATED 36 575 - -
Car04g01411 579 Pfam Glycosyl hydrolase family 10 228 464 IPR001000 GO:0004553|GO:0005975
Car04g01411 579 Pfam Carbohydrate binding domain 50 132 IPR003305 GO:0016798
Car04g01411 579 PANTHER GLYCOSYL HYDROLASE 36 575 IPR044846 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01411 Car-Chr4 14389215 14393943 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01411 21 554 Glycoside Hydrolase AT4G33840 50.838 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01411 - - mtr:MTR_1g106770 884.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01411 04 14389215 14393943 Car04g01411 04 14389215 14393943 ECH