Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01398 ATGAAACTAAGACTCAGATCTTTCGAATCCAAAGAAACCCTAAAAATCGAAGTTCCCGATCCATGTTCCTTTCACCAACTCAAACAAACCATTTCTCATGCAATCtcttcttcttcttcttcctcttcttctctccatctATCCCTCAACAGAAAAGACGAAATCGACGCTTCTTCGCCCGAAGACTCTCTCCATTCAATTGGCATCGCCACCGGCGACCTCATCTTCTACACATTCAACCCCAACACCTTCTCCCGCGAAACCCTCCCTCACAAACCCACCCCACAACAAGAACCCCATTCCAACCATCGACCCATCATTCAAGACTCGCCGGAAAACAACGCCGGCGACACTCATTCGATTCCAATCGGAGAAAAGTCTCCGGCTTTGAACCCTGCAGATTCAGAAAACGTAGAAATGGTTGACGTGTCTGATGAGGCGGTGGTAGTGTTGAAGAACAATTCTGAACCTGAGTTTGTGAAAAGAGTTCTTAAAGAAGCGCTTGGCGATGACTTTAGCGATTTCAAGCTATTGGTATTTGCGGTTCATGCTGTTATTCTTGAATCTGGGTTTGTTCGTGTTGATCAGGTTTCGGGTATGGCGATTAGTTGCTCTCATCTTCTTGATGATTGTTCTTCTTCTTCAATGATATCTTTGAGGTATACTCTTCCTGAGATTCTCACTAATGGTTCATCTCATGCTGTGAATTTGAAAATTCAGAAATTAGGGAATTTTGTGAATGTTTGTGGTTCATTGTGTGATGACGTAGGCTCTAGGGTTCATAGGGTTTATTTAGATAAATGTAGATTTGCCAAGCCTTTAGAGTTTATGATGTTGGAGAGTTCTGAATCTAATGCTAGTGGTGTTAATGATGGTGGAGATGAAGTTTTTGAATTGTGGAAGATTGTTAAAGATAGGCTTGCATTACCACTTTTAATTGATCTTTGTGATAAAGTTGGATTGGATCTTCCACCTTGTTTTATGCGACTCCCGATGGAACTTAAGCTTCTGATATTTGAGTATCTTCCTGGTGATGATTTGGCTAAAGTGTGTTGCACGTGTTCAGAATTGCAATACCTTGCTTCAAACGATGAGTTGTGGAAGAAGAAGTTTGAGGAGGAGTTTGGACAAAGGATGGATGGAGGGAAGTTTTTTAAGAACTTGTTTGCTCATTACCGGGCAACGAAGAAGAAAGCTGAGCAACCGCTTCCTGTTCGAATTCGTCGCAGTGGTATTATGAGATACTTTCAAAGGAGAAGAGGCCCTATTCCTTTTGGAAGGCCTCCAATTTGGGGTGGAGAGTTTGATCTGCATCCAGAAAAACCGGATCCCGATCCACTGACCTTAGCATGGGAAAGGCAGGGTGCCTGTCACTCCGAATGTGCCGTCAGATCAATCTAA 1401 0.419 MKLRLRSFESKETLKIEVPDPCSFHQLKQTISHAISSSSSSSSSLHLSLNRKDEIDASSPEDSLHSIGIATGDLIFYTFNPNTFSRETLPHKPTPQQEPHSNHRPIIQDSPENNAGDTHSIPIGEKSPALNPADSENVEMVDVSDEAVVVLKNNSEPEFVKRVLKEALGDDFSDFKLLVFAVHAVILESGFVRVDQVSGMAISCSHLLDDCSSSSMISLRYTLPEILTNGSSHAVNLKIQKLGNFVNVCGSLCDDVGSRVHRVYLDKCRFAKPLEFMMLESSESNASGVNDGGDEVFELWKIVKDRLALPLLIDLCDKVGLDLPPCFMRLPMELKLLIFEYLPGDDLAKVCCTCSELQYLASNDELWKKKFEEEFGQRMDGGKFFKNLFAHYRATKKKAEQPLPVRIRRSGIMRYFQRRRGPIPFGRPPIWGGEFDLHPEKPDPDPLTLAWERQGACHSECAVRSI 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01398 466 ProSiteProfiles F-box domain profile. 324 370 IPR001810 GO:0005515
Car04g01398 466 PANTHER F-BOX PROTEIN SKIP22 1 444 - -
Car04g01398 466 Gene3D - 327 409 - -
Car04g01398 466 Gene3D - 155 326 - -
Car04g01398 466 MobiDBLite consensus disorder prediction 86 133 - -
Car04g01398 466 MobiDBLite consensus disorder prediction 86 117 - -
Car04g01398 466 PANTHER F-BOX PROTEIN SKIP22 1 444 - -
Car04g01398 466 SMART fbox_2 330 370 IPR001810 GO:0005515
Car04g01398 466 SUPERFAMILY F-box domain 324 380 IPR036047 GO:0005515
Car04g01398 466 Pfam F-box-like 329 369 IPR001810 GO:0005515
Car04g01398 466 Gene3D - 1 78 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01398 K10293 - gmx:100778313 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01398 04 14297496 14299460 Car04g01398 04 14297496 14299460 ECH