Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01391 ATGGCAATGATTTTCAAGTCAATGTCCGCTTCAACAAGCGATCTAAGCTTTGTGAGACAATCTTGTATATCTGGAAACCCTTCATTAGATTTGAAAAATAGGGCTTTCAATTTTGGATTTTGTTGCAAGGGAGAAGAGAAATGGAAGGTAAAATATGGGGTTGCTAAGGTTCGAGCAACAGTGGAATTGGGTGTGAAAAAAGGAAGCAATGTTGCATTGGAGGGAACTTTAGGGTTGGATTTGGTTTCAGAAGGAGAGTTAATGGTGAAGGGTTTTAGAGGGTTGAGGAAGACAAAGCTTGTGTGCACTGTTGGTCCTGCTTGTAGTTCATTGGAGGATTTAGAGAAGTTGGCAATGGGTGGAATGAACGTTGCAAGGCTTAATATGTGTCATGGTAGTAGAGAATGGCACCGTGATGTTATTAGGAAGATTAAGAAGATGAATGAGGAAAAGGGTTTTTCTGTTTCTGTTATGATTGATACTGAGGGTAGTCAGATTCATGTTGTTGATCATGGAGCACCTTCTTCGGttaaagtagagGAAGATTCAACTTGGTTGTTTACTACTGAACATTTTGAGGGTTCTCGTCCATTCACCGTTCAAGCAAACTATAAAGGCTTTTCTGAAGGTATTGAAGTAGGTGATGAACTTGTTATTGATGGTGGAATGGCATGCTTTGTAGTCATTGAAAAAACTGGAAATGATTTGCACTGTAAGTGCATAGATGCTGGTCTTTTCTTACCTGGAGCCAAATTTAGTTGCTGGAGAGATGGAAAGCTTGTAAGGAGGAATTACAAGTTCCCCACTCTATCAACAAAGGATTGGGCTGACATTAACTTTGGTATAGCTGAGGGTGTTGATTTTTTTGCCTTATCCTTTGTCAATCATGCTGACTCTGTTAAGGATTTAAAGAACTACCTCTCTTCCAAATCACCCAAATCCATAAAAGTATTGGCAAAGGTAGAAAGCCTAGAATCGCTTAATAATCTGGAGGAAATAGTGAAAGCTTCAGATGGGATCGTGGTAGCTCGTGGTGACCTTGGAGTCGAAATACCACTTGAACAAATTCCAACAGTCCAGGAGCATATTGTTCGCATTTGCAGACAACAAAATAAGCCAGTGATTGTAGCTTCTCAGCTTCTTGAGTCAATGGTTGAGTATCCAACACCAACTCGTGCTGAGGTAGCAGATGTTTCTGAAGCAGTTCGACAATATGCGGATGCTTTGATGTTATCTGGTGAGTCAGCTATTGGTTCATTTGGACAGAAAGCTTTGGCAGTGTTGGATATGACTAGCAGTAGAATGGAATCATGGAGTAGAGAGGAAAACAGACAAAATCTTCTCAATAACCATAAACTTGGAGCATCATTGCCAGATTGCATCACTGAGCAAATATGCAATTGTGCTGTTGAAATGGGTACTTCGCATTCTTTCTTGCAACtttggataaccagcttaattcagcactcatcatataagtacttatgtataagttatttttttaatataaaatatacaataaaatcgaactgttttcatataaactataaactattttcataa 1563 0.3698 MAMIFKSMSASTSDLSFVRQSCISGNPSLDLKNRAFNFGFCCKGEEKWKVKYGVAKVRATVELGVKKGSNVALEGTLGLDLVSEGELMVKGFRGLRKTKLVCTVGPACSSLEDLEKLAMGGMNVARLNMCHGSREWHRDVIRKIKKMNEEKGFSVSVMIDTEGSQIHVVDHGAPSSVKVEEDSTWLFTTEHFEGSRPFTVQANYKGFSEGIEVGDELVIDGGMACFVVIEKTGNDLHCKCIDAGLFLPGAKFSCWRDGKLVRRNYKFPTLSTKDWADINFGIAEGVDFFALSFVNHADSVKDLKNYLSSKSPKSIKVLAKVESLESLNNLEEIVKASDGIVVARGDLGVEIPLEQIPTVQEHIVRICRQQNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGSFGQKALAVLDMTSSRMESWSREENRQNLLNNHKLGASLPDCITEQICNCAVEMGTSHSFLQLWITSLIQHSSYKYLCISYFFNIKYTIKSNCFHINYKLFS 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01391 520 PANTHER PYRUVATE KINASE 44 473 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Car04g01391 520 PANTHER PYRUVATE KINASE 44 473 - -
Car04g01391 520 PRINTS Pyruvate kinase family signature 286 300 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Car04g01391 520 PRINTS Pyruvate kinase family signature 394 412 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Car04g01391 520 PRINTS Pyruvate kinase family signature 413 429 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Car04g01391 520 PRINTS Pyruvate kinase family signature 317 343 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Car04g01391 520 PRINTS Pyruvate kinase family signature 344 368 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Car04g01391 520 PRINTS Pyruvate kinase family signature 369 393 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Car04g01391 520 PRINTS Pyruvate kinase family signature 153 169 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Car04g01391 520 Gene3D - 96 435 IPR040442 -
Car04g01391 520 Pfam Pyruvate kinase, barrel domain 96 437 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Car04g01391 520 Gene3D - 164 268 IPR015806 GO:0004743|GO:0006096
Car04g01391 520 Gene3D - 436 472 IPR036918 -
Car04g01391 520 ProSitePatterns Pyruvate kinase active site signature. 315 327 IPR018209 GO:0004743|GO:0006096
Car04g01391 520 SUPERFAMILY PK beta-barrel domain-like 166 247 IPR011037 -
Car04g01391 520 TIGRFAM pyruv_kin: pyruvate kinase 96 475 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Car04g01391 520 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 89 439 IPR015813 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01391 Car-Chr4 14172967 14177342 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01391 K00873 - gmx:100780644 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01391 04 14172967 14177342 Car04g01391 04 14172967 14177342 ECH