Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01120 ATGCCAGCGACGGACTATCAAGGATCGCCTCCTTCATCGTTATCCCATTTTGGCCGTTCAATTCTAAGCTTTCGTCGTGAACAAGTTCACTCAATGGAAGGGTCAACCTTAGAGGTTGAGCTTGATTGTTTTCAACAACATGTGACTGATCGGTTTCTTGATATATCTTCTGTTGTTCAAGATGATTTGCTTTCACTCAAATGGGTTGGTAAGCTTCTTGATTGTTTCCTCATTTGTCAAGAAGAATTCAAAGCCATTCTTCACACACACAAAGGTCAGGTTTTGAAACCCCCTTTGGATCGAATGGTTTCTGAATATTTTGAACGAAGTGTTAAGGCTTTGGATGTTTGTAATGCCATTCGTGACGGTATCGAACAGATTCGTCTATGGCAGAAGCTTTTAGAGATTGTGCTTTGTGCATTGGGGAATCAAAGGAGTATTATTAGTGAAGGTCAATTTCGTAGAGCTAAGAAAGCTCTTATTGATTTGTCAATTAGTATGCTTGATGATAATAAGGATTCTTCCAATGCTAATATTGCACATCGAAATCGATCTTTTGGTAGGAACAATGCTGGTAGAGATAGAGatcaaaatcatcatcataacaactatcatcatcGGTCTTTGGGGCATTTTAGGTCACTTTCATGGAGTGTTTCTCGTACTTGGTCAGCTGCTAGACAGCTCCAAGCAATTGGGAACAACATTTGTCCACCAAGAGCTAATGATCTTGTTGCAACTAATGGTCTTGCAATGCCAATTTACATCATGAATTCGATCTTGTTGTTTGTTATGTGGGCTCTTGTGGCTGCCATTCCTTGCCAAGACCGCGGGTTGCACGCTCATTTCACCATTCCAAGGAGTTTCACTTGGGCTATTCCATTGCTCTCTCTTCATGAGAGGATTACTGAGGAGTCCAAGAAGCGTGACAGGAAGAATACCTGCGGCTTGCTTAGAGAGATTCAACAGATTGAGAAATGTGCTAGAGTGATGAGCGAATTGGTTGATTCTGTTCAATTTCCAATTACGGAGGAGAAGGAAGGGGAAGTTAGAGAAAGAGTTCACGAGGTTTCACAAGTTTGTGATGCTTTGAAAGATGGACTTGACCCTTTGGAGCGCCAAGTGAGGGAAGTTTTCCATAGAATCGTGCGCAGTCGAACCGAAGGGCTTGACTCTCTTGGCAGGCCAAGCAATGCTGAGTAA 1203 0.414 MPATDYQGSPPSSLSHFGRSILSFRREQVHSMEGSTLEVELDCFQQHVTDRFLDISSVVQDDLLSLKWVGKLLDCFLICQEEFKAILHTHKGQVLKPPLDRMVSEYFERSVKALDVCNAIRDGIEQIRLWQKLLEIVLCALGNQRSIISEGQFRRAKKALIDLSISMLDDNKDSSNANIAHRNRSFGRNNAGRDRDQNHHHNNYHHRSLGHFRSLSWSVSRTWSAARQLQAIGNNICPPRANDLVATNGLAMPIYIMNSILLFVMWALVAAIPCQDRGLHAHFTIPRSFTWAIPLLSLHERITEESKKRDRKNTCGLLREIQQIEKCARVMSELVDSVQFPITEEKEGEVRERVHEVSQVCDALKDGLDPLERQVREVFHRIVRSRTEGLDSLGRPSNAE 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01120 400 MobiDBLite consensus disorder prediction 175 205 - -
Car04g01120 400 MobiDBLite consensus disorder prediction 187 203 - -
Car04g01120 400 PANTHER OS04G0688000 PROTEIN 1 398 - -
Car04g01120 400 Pfam Protein ROH1-like 14 393 IPR008511 -
Car04g01120 400 PANTHER BPS1-LIKE PROTEIN 1 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01120 Car-Chr4 11303325 11305318 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01120 - - ccaj:109812538 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01120 04 11303325 11305318 Car04g01120 04 11303325 11305318 ECH
Car08g01142 08 12128019 12129905 Car04g01120 04 11303325 11305318 PCT