Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01064 ATGTTAAAGCAAGAGCAAGAAGAGTTTGAGGTTGTCCGTACCCTGCCTTCTCATTCAGATTCCATTGAGTGTGTTGGGTTCGCACCAAGTGGTTCCTGGGCTGCAATTGGAGGCATGGATCCAAAAATGATCATATGGGATTTAGAGCACTCCTTAGCCCGAAGCACTTGTGAGCACGAGTATGGAGTGACATGTATGACATGGCTCGGCACATCGTATCTGGCAACTGGATCTATGGATGGAATTGTGAGATTATGGGACTGTCGGTCTGGTGAATGTGTCAGAACATTCAGAGGGCACTCTGATGGCATTCAATCGCTTTCTTTGTCAGCTAATCGCGATTACCTTGTCTCAGCTTCTTTAGATCACACAGCACGTGTTTTCGATGTTAAAGGATTTTGTTAA 405 0.4543 MLKQEQEEFEVVRTLPSHSDSIECVGFAPSGSWAAIGGMDPKMIIWDLEHSLARSTCEHEYGVTCMTWLGTSYLATGSMDGIVRLWDCRSGECVRTFRGHSDGIQSLSLSANRDYLVSASLDHTARVFDVKGFC 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01064 134 PANTHER MITOCHONDRIAL DIVISION PROTEIN 1-RELATED 11 131 - -
Car04g01064 134 PANTHER MITOCHONDRIAL DIVISION PROTEIN 1-RELATED 11 131 - -
Car04g01064 134 ProSiteProfiles Trp-Asp (WD) repeats profile. 97 131 IPR001680 GO:0005515
Car04g01064 134 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 15 49 - -
Car04g01064 134 SMART WD40_4 50 87 IPR001680 GO:0005515
Car04g01064 134 SMART WD40_4 90 129 IPR001680 GO:0005515
Car04g01064 134 SMART WD40_4 8 47 IPR001680 GO:0005515
Car04g01064 134 SUPERFAMILY WD40 repeat-like 9 130 IPR036322 GO:0005515
Car04g01064 134 Pfam WD domain, G-beta repeat 91 129 IPR001680 GO:0005515
Car04g01064 134 Pfam WD domain, G-beta repeat 10 47 IPR001680 GO:0005515
Car04g01064 134 Pfam WD domain, G-beta repeat 58 87 IPR001680 GO:0005515
Car04g01064 134 ProSiteProfiles Trp-Asp (WD) repeats profile. 56 96 IPR001680 GO:0005515
Car04g01064 134 ProSitePatterns Trp-Asp (WD) repeats signature. 74 88 IPR019775 -
Car04g01064 134 Gene3D - 2 134 IPR015943 GO:0005515
Car04g01064 134 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 97 134 - -
Car04g01064 134 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 56 92 - -
Car04g01064 134 ProSiteProfiles Trp-Asp (WD) repeats profile. 15 56 IPR001680 GO:0005515
Car04g01064 134 ProSitePatterns Trp-Asp (WD) repeats signature. 34 48 IPR019775 -
Car04g01064 134 PRINTS G protein beta WD-40 repeat signature 34 48 IPR020472 -
Car04g01064 134 PRINTS G protein beta WD-40 repeat signature 74 88 IPR020472 -
Car04g01064 134 PRINTS G protein beta WD-40 repeat signature 116 130 IPR020472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01064 Car-Chr4 10803732 10805412 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01064 7 133 Miscellaneous Gene Families AT5G08390 30.827 8.65e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01064 K24725 - cam:101499158 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01064 04 10803732 10805412 Car04g01064 04 10803732 10805412 ECH