Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01063 ATGTGTAGTATGTGCCATTATTGCGGTGCAAGCTTGACGGAATCAATTGCTGACAATAAGAAACATGGAAATGAGAGTAGTTTAAAGCTGAATGGAAAAGTCCCCTTAAAACCTTGTAAAGCTTGCAGAGAGAAGCTAGAGCAAGAAAATGTGAAATCGAATAGTACAACAAGTCCGTATGCCACACCATATATCAGTCCAAGTGCATCGCTGTCAAGTACTGACAGCTGTGTGTCCACTTGCAGCGAGTTTTCAGTTGACGTTAATTCATCTTCATCTGACAGGAATAGCCGAGAAGACAGTATAGTTGAAGGTGTTATGGTAGATCTTGATTCTAAGTGGAATGCAAAATCACCAACTGTGGCGAAAAACAACACCCAAGAAAGAAGTAATGATATCGAGGGCTATACTGTGAGAGACATAGAGATTGCAGATGGAGATAGCTTTCAAGAAGCTAAGGCTGAGGATTCTGAAGACCCAACCCTATCCTCTGCCGAAGAAAATGAATATTCTTTTCGCGATGATTTGGATATCCAAACATGGGAACCACCCGAGCCAGAAAACCCGCAGGATGATATGGACAATTGTGTGGCATGTAATGATGATGATGAGGATCAGGGCATTGGGATTGCGAACTGGGGCGAGCCAACCGCTATGAGTAGTTCTAAGGATGAATTAGGTGGGGGCTATAGGTTTAGAGAGGAAAGACAAAGAGAATTGGAAAAAGTATTGAATGGGAAATTTAAGGCTCTTGTAGGTCAGCTTCTTAAATCCGTGGGAGTTTCCTCTTCTGATGAAGGTGATAAGAGTTGGGTTGACATAGTTACATATTTATCTTGGGAAGCTGCGGCATTTTTGAAGCCTGATGCTATCGGAGGTAATGCGATGAATCCTGATGGGTTTGTTAAAGTGAAATGCGTTGCAGCTGGTACTCGCAGCCAAAGTCGACTATTCAAAGGTTTGGTCTTCAAAAAGCACGCCGCTCATAAGCATATGCCAACTAAGTACAAAAATCCAAGGTTGCTACTGATTAAGGGCATGCTTGGCCATTCTATGAATGCACTGTCCTCGTTTAACTCCATGGACCAGGAGAAAGGCTATTTGAAATCTAAAATGGATCTTATAACATTATGTCATCCAAATGTTATATTAGCGGAGAAAACAGTTTCTCGTGATATACAAGAGGCGATTCTGGACAAGGGGATGACACTAGTACTTGATATGAAGCTTCATCGACTGGAAAGAGTTGCACGTTGCACTGGTTCACGAATTCTTTCATGCGATGATTTGAACGGCCAAAAACTACGACAGTGTGACTCTATTTATTTTGAGAAATTTGTGGAGGAACATGATGGTACTGGTGAAGGAGGAAAGAGGCCCACCAAGACCTTGATGTTTATCGAGGGATGTCCTACACGTCTCGGCTGTACGATTTTGCTGAAAGGAACACACAGCGATGAACTGAAGAGGATCAAATGTGTCATGCGGTGTGCAGTTATAATGGCATATAACTTAATCCTCGAAACCTCTTTTCTTGTTGATCAGAAAGCAATGTTCTCTACTATTCCTCCAGTTAATATGGCAGATATCTTGCCACTCAATAAAGAATCCAGCGATTCAGCTTCTATTTATTCAAGTGTTCCGTCTGTTGAGCGTTCTGATGAAAATGGAATAGTTAGTACTGATATTCCCATATACAATGGACTTCATGAAAAAAGTACCGATGATTTAACCGTAGAAACTGAAGAGTTTTCACCATTTTCTTATGAGCCATATAATCCAGCTGTCTTTTCTGGATTCTCAGCAATTTCATCTTCTCTGAAAAAGGTTATGGGGGACAGTTTCCAGCTGTCTGCTCCTTACCAGTCTCTATCGACATACTTTGGCTTCAATGGAAGGAAACTTAATGTTCAGGTCAACAATTCTGTTTCTATTATAGACTCTCCGGAGGCAGATGAAAATACTAAGATTGAAGATAAAAATAATTCTGATGAAGTAAAGTTGCTTAACGAGGGACAAACCCTGTCTTCACCCGTGTACTTGGATTCCAATGGTGATATAACTAAAGTTGATAATGATAGAAAAGAACTCCAAAGTAAAGATGATATCAATGCAGTGTTGGATTCTCAGAGTATTTTGGTCTTGATGTCTAGCCGTAACGCCTTAAGAGGAACTGTATGCCAACAAAGTCATTTTTCCCATATTATGTTCTACAAGAATTTCGACATCCCACTTGGAAAGTTTCTGCAGGATAACCTTCTCAATCAGACAAGAACTTGTGACACCTGTCAAGAATTGCCGGAAGCTCACCTTTATTATTATGCTCATCACAATAAACAACTTACTATACAAGTGAAACAATTGCCGCCAGGAATTATTTTGGCTGGGGAGGCTGAACAGAAAATTTGGATGTGGAGCCGCTGTGGAAAATGCAAGTCTTGTTCTACAAAGAGAGTGTTGATATCCACCACTGCTCGTAGTCTATCGTTTGGAAAATATTTGGAGCTTAGCCTTTCTCACTACTCATCTAGCAGAAAATTGAGTTGTGGTCATTCTCTTGATAGAGATTTTCTCTACTTCTTTGGATTAGGTCGCATGGTTGCAGTGTTCAGATATTCTTCTGTCATTACTTATACTGTGTCTATGCCTCCTCAAAAGCTAGAGTTCAGTGGTGCAATAAAACAAGAGTGGCTTTTGAAAGAGGCCGAGAATGTGCACATGAAAGGCATATCACTATTCACAGAAATTGCAAAATGTTTGAAGACAATACAATTTGATGGAACAACCTCTAACCGAGGATCGAAAAGAGAGTTCTCTGAGGTTGAGAAGATGTTAAAGCAAGAGCAAGAAGAGTTTGAGGTTAACATCAAGATTGTTGTTGCTAAGAAAGGTGATCCAAGCCGGTCTGCCTATAAACTACTCAGTCTAAACCGATTGATGTGGGATCTTCTGATCGAATCCGCTGTGTGGGATCAACGCTTGAACGCATTACGCTCACCGGAGAAACCTGTGCAAGAGTATAGTTTGTCAAAGGCGAAAGGTACTGCTGGTAGAGAAACTGCATCTACAGGTAGTTTTAGGGAAAATGGCTATGTGAATGGGGATGCAGATGAAAAAATTATGTCGGAAATATCTGTGGAAGTAAAGGAAATTCCTATCAGCGGATCTCCTCTAGAGTGCAATGAACAGGATGATCCAAACACTTTTGATGTCTCACAGAATGTAAAAATACAGACTGTTGATGGTTCGGGATCGAATAAATCTTCTGATCAAAAGTTGGAATCGAGGTCAGATGTTTTAACTCAGTTTCCTTCTGCAAATGGACACCTTCAAGTACATGAAAAATTAACAGTTGCTACAGATATTCAACCTATTCGTCCAATCGCTGATGTTAAGGTATTAAACAAGAGTGCTTTACTGCACTCACCAGTTTCCAACTTACCTAGTGAATGGTTCTGGAAGCCATTTGCTGATATTCGACAGATAGGCATAAGGGAATTTCAGAAAAGTTTCTTTCCGAAGTTTGAATATTTTTTCAGCTCTATTGCGGAACATGTTCCAACAGGGAATCAATTAATCACTGAGGAAGGTCCAAGGTTGCACATTCCTCTCAAGACAGATAATCATATTGTGTCTGACTTTGAGGGTGAACCCTCCAGCATAATTGCTTGTGCGCTAGCCTTGTTGAAAGATTCATCTGAGGTCACAGAAGTAGACGAAGGTGATGTGAGAGAAAGTGGAATAACTTCAAAATCTACAGATTCTTTGCATGGCTTTCCAGATTCAGATTCTGTGCACTCTAATGGAAGCACTTCTTCAGAAGCGTCACAAACATTTCGTGCTACAGAAAACCATAGCATAGAAATTCATTTTGGTTATGCAAAATCACTTGGGAGGGAAAAATATTCAGTTATTTGTCACTATTTTAAGCAGTTCCGTGCACTTAGAAATTCGTGTTGCCCATCTGAGATTGATTATATTGCTTCTTTAAGCCGATGTATGAATTGGGATGCCAAAGGTGGAAAAAGCAAGTCTTTTTTTGCTAAAACAGTTGATGACAGGTTTATCATAAAGGAAATCAAGAAGACAGAACTTGAAGCATTTTTGGGGTTCTCTTCTCTGTATTTCAAACACATGAGAGAGTCATTTGAGTCGGGGAGCCAAACCTGTCTTGCAAAAGTCTTGGGGATATATCAGGTTACGAAACGACATGTTAAAAGTGGAAAAGAGGTTAAACATGACTTCGTGGTGATGGAAAATCTTGCGTACAACCGACATATTGTGCGCCAGTATGATCTTAAAGGTGCTCTTTTTGACCGTTATAATTCAGCTGCTGTTGGGGCTGGAGATGTTCTTTTGGATCAGAACTTTGTGAATGACATGAACTCTTCCCCATTATATGTCAGTCATAAAGCAAAGCGAGTTCTTCAGAGGGCTGTTTGGAATGACACATCTTTTCTCAATTCAATCAATGTGATGGATTATTCTTTACTTGTTGGAGTTGATTCTCAGAAGCGCGAACTTGTTTGCGGGATCATTGATTATCTCAGGCAGTATACATGGGACAAACATCTAGAGACATGGATGAAGTCTTCACTTGTTGTCCCCAAGAATCTATTGCCAACTGTAATTTCTCCAAAAGAATACAAGAAAAGGTTCAGGAAGTTTATGTCTACATATTTTTTAAGTGTTCCAGATCATTGGTGTTCTCAGATATCCCCTATTCCTTGCAAAGTTTGTTGCTCAGGAGAAGATGACACTTCCCAACAAAAACCCTAG 4779 0.4015 MCSMCHYCGASLTESIADNKKHGNESSLKLNGKVPLKPCKACREKLEQENVKSNSTTSPYATPYISPSASLSSTDSCVSTCSEFSVDVNSSSSDRNSREDSIVEGVMVDLDSKWNAKSPTVAKNNTQERSNDIEGYTVRDIEIADGDSFQEAKAEDSEDPTLSSAEENEYSFRDDLDIQTWEPPEPENPQDDMDNCVACNDDDEDQGIGIANWGEPTAMSSSKDELGGGYRFREERQRELEKVLNGKFKALVGQLLKSVGVSSSDEGDKSWVDIVTYLSWEAAAFLKPDAIGGNAMNPDGFVKVKCVAAGTRSQSRLFKGLVFKKHAAHKHMPTKYKNPRLLLIKGMLGHSMNALSSFNSMDQEKGYLKSKMDLITLCHPNVILAEKTVSRDIQEAILDKGMTLVLDMKLHRLERVARCTGSRILSCDDLNGQKLRQCDSIYFEKFVEEHDGTGEGGKRPTKTLMFIEGCPTRLGCTILLKGTHSDELKRIKCVMRCAVIMAYNLILETSFLVDQKAMFSTIPPVNMADILPLNKESSDSASIYSSVPSVERSDENGIVSTDIPIYNGLHEKSTDDLTVETEEFSPFSYEPYNPAVFSGFSAISSSLKKVMGDSFQLSAPYQSLSTYFGFNGRKLNVQVNNSVSIIDSPEADENTKIEDKNNSDEVKLLNEGQTLSSPVYLDSNGDITKVDNDRKELQSKDDINAVLDSQSILVLMSSRNALRGTVCQQSHFSHIMFYKNFDIPLGKFLQDNLLNQTRTCDTCQELPEAHLYYYAHHNKQLTIQVKQLPPGIILAGEAEQKIWMWSRCGKCKSCSTKRVLISTTARSLSFGKYLELSLSHYSSSRKLSCGHSLDRDFLYFFGLGRMVAVFRYSSVITYTVSMPPQKLEFSGAIKQEWLLKEAENVHMKGISLFTEIAKCLKTIQFDGTTSNRGSKREFSEVEKMLKQEQEEFEVNIKIVVAKKGDPSRSAYKLLSLNRLMWDLLIESAVWDQRLNALRSPEKPVQEYSLSKAKGTAGRETASTGSFRENGYVNGDADEKIMSEISVEVKEIPISGSPLECNEQDDPNTFDVSQNVKIQTVDGSGSNKSSDQKLESRSDVLTQFPSANGHLQVHEKLTVATDIQPIRPIADVKVLNKSALLHSPVSNLPSEWFWKPFADIRQIGIREFQKSFFPKFEYFFSSIAEHVPTGNQLITEEGPRLHIPLKTDNHIVSDFEGEPSSIIACALALLKDSSEVTEVDEGDVRESGITSKSTDSLHGFPDSDSVHSNGSTSSEASQTFRATENHSIEIHFGYAKSLGREKYSVICHYFKQFRALRNSCCPSEIDYIASLSRCMNWDAKGGKSKSFFAKTVDDRFIIKEIKKTELEAFLGFSSLYFKHMRESFESGSQTCLAKVLGIYQVTKRHVKSGKEVKHDFVVMENLAYNRHIVRQYDLKGALFDRYNSAAVGAGDVLLDQNFVNDMNSSPLYVSHKAKRVLQRAVWNDTSFLNSINVMDYSLLVGVDSQKRELVCGIIDYLRQYTWDKHLETWMKSSLVVPKNLLPTVISPKEYKKRFRKFMSTYFLSVPDHWCSQISPIPCKVCCSGEDDTSQQKP 1592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01063 1592 Pfam TCP-1/cpn60 chaperonin family 254 511 IPR002423 GO:0005524
Car04g01063 1592 SMART PIPK_2 1273 1562 IPR002498 GO:0016307|GO:0046488
Car04g01063 1592 SUPERFAMILY SAICAR synthase-like 1297 1561 - -
Car04g01063 1592 MobiDBLite consensus disorder prediction 1008 1030 - -
Car04g01063 1592 MobiDBLite consensus disorder prediction 1015 1029 - -
Car04g01063 1592 CDD Fab1_TCP 249 515 - -
Car04g01063 1592 Coils Coil 931 951 - -
Car04g01063 1592 SUPERFAMILY GroEL apical domain-like 314 482 IPR027409 -
Car04g01063 1592 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1240 1561 IPR002498 GO:0016307|GO:0046488
Car04g01063 1592 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1507 1559 IPR002498 GO:0016307|GO:0046488
Car04g01063 1592 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1339 1505 IPR002498 GO:0016307|GO:0046488
Car04g01063 1592 Gene3D GroEL 313 482 IPR027409 -
Car04g01063 1592 Gene3D - 1421 1562 - -
Car04g01063 1592 MobiDBLite consensus disorder prediction 119 138 - -
Car04g01063 1592 PANTHER 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1D-RELATED 167 1589 - -
Car04g01063 1592 CDD PIPKc_PIKfyve 1301 1561 IPR044769 GO:0000285
Car04g01063 1592 MobiDBLite consensus disorder prediction 1248 1279 - -
Car04g01063 1592 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1259 1420 IPR027484 -
Car04g01063 1592 MobiDBLite consensus disorder prediction 150 174 - -
Car04g01063 1592 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 167 1589 - -
Car04g01063 1592 MobiDBLite consensus disorder prediction 1237 1279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01063 Car-Chr4 10782259 10792766 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01063 332 1571 Acyl Lipid Metabolism Gene Families AT1G34260 48.099 0.0 1073
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01063 K00921 - gmx:100809696 2384.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01063 04 10782259 10792766 Car04g01063 04 10782259 10792766 ECH