Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01060 ATGATACTCCAAACACAAACACAAACACAACAACAACATCTTCTGCTACTGTCTTTTTTCCTATTCTCCACTCTCATCTCCACCATTGCAGCAGCAACAACCTTAATCTCACCAGGCACAACAACCCTTTATGCTTCAAACACAAACCAATCATGGTCCTCTCCCAACAACACTTTCTCTCTCCATTTCCTACCTCTCCACCCTCAAACCACCCCTCCTTCCTTCTTCGCCGCCATCGTCTTCTCCGGCGGATCACCCGTCATTTGGACCGCCGGAAACGGTGCCACCGTCGACTCCAACGGCTCCTTCCAATTCCTCTCCACCGGAAATATTCTCCTCGTTAATGGGTCGGGCTCAACTTTGTGGGAATCCGGAACTTCCAAAATGGGTGTCTCCTCTGCCATGCTTCATGAAAATGGAAACTTGGTTCTCTCCAATGGCAAAAAATCTGTTTGGTCGAGCTTTGACAACCCAACTGATACAATTGTTCCCTCTCAGAATTTCACTGTTAGTATGGTTTTGCGTTCTGGTTTGTACTCATTTTCTGTTCTTAATTCTGGTAACCTCACTCTCAAATTTAATGACACTGTGCCTTATTGGGATCAAGGTTTGAACTTTTCCATGAGTTTGATGAATTTGAGTTCACCTGTTTTGGATTTGCAATCAAAGGGAATTTTGCAGATTTTGTATCCTAATTTGACTTCCCCTGTGGTGGTTGCTTACACCAatgattatggtgaaggggatgatgatgttttgaggattttgaagcttgatggtgatgGGAATTTGAGAATTTATAACTCTAGAAAAGGTAGTGGGGATGTGAGTGTTGGATGGGTTGCTGTTGAGGATCAATGTGAAGTTTTTGGTTATTGTGGGAATAATGGTATTTGTAGTTATAATAATAATGATTCAATTTCTAAGCCCATTTGTGGATGTGCATCTCATAATTTTGAGATGGTTGATTCTAATGATAGTAGGAAAGGGTGTGTGAGGAAAGTGAGGCTTGAAGATTGTGTAGGAGAGGTGGCTATGTTGCAAGTGAACCATGCTAGATTCTTGACATATCCTCCACAGTTTGTGATCAACCCTGAGATATTTTTTGTTGGTTTATCAGCTTGTAGTGGAAATTGTCTTCAATCTGGTTCTTGTTTTGCTTCTACTTCTTTGTCGGATGGAACTGGATTATGTTACATTAAGACTAGTAATTTTATTAGTGGATACCAGAATCCTGCTTTACCTAGCATTTCATTCATCAAGGTTTGTGGACCATTGGCTCCAAACTCATCAACTCCATTGGAGAATGTCGCAGAGAGGAAGGAATGGAGGATACACGCATGGGTAGTTGCTATAATTGTTTCGAGTACCGTTTTAGGTTTTCTTGTCTTTGAGGGTGGTTTATGGCTGTGGTGTTGTAGAAGCGGATCGGGAGTTGGAGGATTAGCAGCTCAATATGCTCTTATTGAGTATGCTTCTGGTGCACCGGTTCATTTCTCTTACAAGGAGCTCCAAAGttacggcatggttttgttagaaatagtgagtggtaaaaggaactTTGAAATCTCAGAAGAAACAAGTGGAAAAATGTTCTCCATATGGGCTTATGAAGAGTTTGAGAAAGGATCTTCTTCTGACTCTGAGGGAATCAAAAGCAATGCCACTGCTTTCTCCACTTTTGCTTCCTCATCAACTCCACCTTACTCTCCCTCTTCAGCTTTGTTGCCTTGA 1734 0.3962 MILQTQTQTQQQHLLLLSFFLFSTLISTIAAATTLISPGTTTLYASNTNQSWSSPNNTFSLHFLPLHPQTTPPSFFAAIVFSGGSPVIWTAGNGATVDSNGSFQFLSTGNILLVNGSGSTLWESGTSKMGVSSAMLHENGNLVLSNGKKSVWSSFDNPTDTIVPSQNFTVSMVLRSGLYSFSVLNSGNLTLKFNDTVPYWDQGLNFSMSLMNLSSPVLDLQSKGILQILYPNLTSPVVVAYTNDYGEGDDDVLRILKLDGDGNLRIYNSRKGSGDVSVGWVAVEDQCEVFGYCGNNGICSYNNNDSISKPICGCASHNFEMVDSNDSRKGCVRKVRLEDCVGEVAMLQVNHARFLTYPPQFVINPEIFFVGLSACSGNCLQSGSCFASTSLSDGTGLCYIKTSNFISGYQNPALPSISFIKVCGPLAPNSSTPLENVAERKEWRIHAWVVAIIVSSTVLGFLVFEGGLWLWCCRSGSGVGGLAAQYALIEYASGAPVHFSYKELQSYGMVLLEIVSGKRNFEISEETSGKMFSIWAYEEFEKGSSSDSEGIKSNATAFSTFASSSTPPYSPSSALLP 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01060 577 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 204 IPR036426 -
Car04g01060 577 ProSiteProfiles Bulb-type lectin domain profile. 27 157 IPR001480 -
Car04g01060 577 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 506 544 - -
Car04g01060 577 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 17 507 - -
Car04g01060 577 Gene3D - 33 156 IPR036426 -
Car04g01060 577 SMART blect_4 43 158 IPR001480 -
Car04g01060 577 Pfam S-locus glycoprotein domain 245 315 IPR000858 GO:0048544
Car04g01060 577 PANTHER OS07G0415500 PROTEIN 506 544 - -
Car04g01060 577 PANTHER OS07G0415500 PROTEIN 17 507 - -
Car04g01060 577 Pfam D-mannose binding lectin 87 172 IPR001480 -
Car04g01060 577 Gene3D - 159 281 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01060 Car-Chr4 10770192 10772699 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01060 - - gmx:100810753 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01060 04 10770192 10772699 Car04g01060 04 10770192 10772699 ECH