Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01055 ATGGGTGGCATTTGCTCAAAGTCATGGAAAGCCACTGTAGATGGTGTAGCTGTAGATAATGTACCTGTTGAAAGCAGCAGTTCAAGGCATGCTAATGGTCATGCTAATAATAACAATGAACCTGGGATCAATTATCATCAGTCTATTTCTGGAAATATTAATAGCAATTCAACTCTGCCTCCTCTTGCGGATGAATTTGATAAGCATCAAAGGGAGTCGTTTTCTTTTACCGGATTGGAAAAGGTTCCGTATGGGCCGGGTGCGGAAGATATCAATGATGGGATTCCTCATTTGTCGAGGGCATTATCGCACAAATCTAGATCAAATAAGTCCAAGCAAGCTGCTGTATCAGAAGTGAGTTCACTCTTGGGAAGAGCTGGTACAGCTGGGCTTGGCAAGGCAGTAGATGTTTTGGACACACTAGGTAGTAGTATGACAAATTTGAATCtcagcagtggttttacatcgggagttacaacaaaaggaaataaaaTTTCAATTTTGGCCTTTGAAGTTGCAAACACAATAGTTAAGGGTGCCAATCTAATGCAATCTCTTTCAAAAGAGAACATTAAACATTTAAAAGAGGTGGTTCTACCATCTGACGGAGTGCAAAATTTGATATCTACAGATATGAATGAACTCCTGAGAATTGCTGCCGCAGACAAGAGAGAAGAATTGAAAATATTTTCTGGTGAAGTTGTGCGTTTTGGAAATCGATGCAAAGATCCTCAGTGGCACAACCTGGAACGCTATTTTGAGAAGTTAGGTTCAGAGCTTTCACCGCAAAGGCAATTGAAAGACGAGGCAGAGATAGTGATGCAACAATTAATGACCTTTGTTCAATATACTGCTGAATTATATCATGAATTGCATGCCTTAGACAGGTTTGATCAAGATTATCGACGCAAGCTTCAAGAAGAGGACAATTCAAATGCCACACAGAGAGGAGACAGCCTTGCAATTTTAAGAGCAGAACTGAAGAGTCAAAAGAAGCATGTAAGAAATTTGAAGAAAAAATCACTGTGGTCCAAGATTTTGGAAGAGGTGATGGAAAAGCTTGTAGATATTGTCCATTTTCTATATTTGGAGATAAACGAAGCATTTGGTTCTGCTGATACGGATAAGCACGTGAAAGATTCTCAAGGCAATCATAAGAAGTTGGGGGCTGCTGGTCTTGCTTTGCATTATGCAAACATTATCACTCAAATTGATACTCTGGTGTCTCGATCAAGTTCTGTGCCTCCTAATACTAGGGATGCTTTATATCAAGGGCTGCCGCCTAATGTAAAATCAGCATTGCGCTCAAGGTTACAATCATTTCAAGTTAAAGAAGAGCTTACTATCCCACAAATCAAAGCTGAAATGGAGAAAACATTGCAGTGGCTTGTTCCTATTGCCGCTAATACAACGAAAGCTCATCATGGTTTTGGATGGGTTGGAGAATGGGCAAATACAGGGTAA 1464 0.39 MGGICSKSWKATVDGVAVDNVPVESSSSRHANGHANNNNEPGINYHQSISGNINSNSTLPPLADEFDKHQRESFSFTGLEKVPYGPGAEDINDGIPHLSRALSHKSRSNKSKQAAVSEVSSLLGRAGTAGLGKAVDVLDTLGSSMTNLNLSSGFTSGVTTKGNKISILAFEVANTIVKGANLMQSLSKENIKHLKEVVLPSDGVQNLISTDMNELLRIAAADKREELKIFSGEVVRFGNRCKDPQWHNLERYFEKLGSELSPQRQLKDEAEIVMQQLMTFVQYTAELYHELHALDRFDQDYRRKLQEEDNSNATQRGDSLAILRAELKSQKKHVRNLKKKSLWSKILEEVMEKLVDIVHFLYLEINEAFGSADTDKHVKDSQGNHKKLGAAGLALHYANIITQIDTLVSRSSSVPPNTRDALYQGLPPNVKSALRSRLQSFQVKEELTIPQIKAEMEKTLQWLVPIAANTTKAHHGFGWVGEWANTG 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01055 487 Pfam Protein of unknown function (DUF668) 388 472 IPR007700 GO:0045927
Car04g01055 487 Pfam Domain of unknown function (DUF3475) 167 223 IPR021864 GO:0045927
Car04g01055 487 PANTHER OS01G0873900 PROTEIN 1 487 - -
Car04g01055 487 PANTHER OS01G0873900 PROTEIN 1 487 IPR045021 GO:0045927
Car04g01055 487 Coils Coil 320 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01055 Car-Chr4 10731460 10740244 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01055 - - gmx:100812676 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01055 04 10731460 10740244 Car04g01055 04 10731460 10740244 ECH