Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01041 ATGGGCGACAAACGAAAGAAGCACCGTCATCAACGCGACTCAACCTCCCCTTCCTCTTCATCCTCTCCCTCCATCGATTCTGATTCAGACTCCGACCGGTCTTCTAGACGCCGCCGCCATCGCCGCGAAAAGGACCGTCGCAGAAAGACCGACGGAAGCTCCAAACGGgaaagagaaagcaggagaaaggagaagagaaaaaagagagacaaagagagGACAAAAACCAAGAGACGCCACTATTCCGATGACTCCCACTCTTCCGACGAGGAATCTCAACCTAGGCTTCAGCCACAAATCGCGCTCCGTGAAATGATCACCGAGTTTCCCAATGTCGGCAACGATTTAATGCAGATATTGCAAATGATTGATAATGGACAAGCTGTTGACATAAAAGATATATCAGAAAGATCTTTAGTGAAGCATCTGAAGAAGCTTTTCATTTCCTTAAATCTTAAGGAAAATGGGGATAGAGTTTTTTTACTGCCGTCTAAAGCTCCACCTACTTTAGATGTTGTTGGTCCTCTAATTCAATCTTATATGCATCCAACGACTGAGCAAGCTGATCCTTCACCCCCATTGCATGAAAGATGTTCGGTTCCGACAGAACAGATTATCGATGACCATTCCACAGATGATCATTCTGTTGGTCCTAGAAAAAGGGTGATTGGTCCTGCAATGCCGTCTGCAGAGTTACTTGCTGCTGCTGCCAAATTAACAGAGGCGCACACCGAGTTCAAAGAAGCTGAATTGGATGACGATACTGAGCTATTTATAGGACCTGCACCGCCTGCTATGGTTACTGAAGCAGAATCAGCTAATGATGCAGAACGTTTTGAAGAGGTCACCAGGATAATGGAAGTTGATATTGACAGCCCATATGATGTTCTAGGTGTTAACCATAATATGTCTGATGTTAACATAAAGAAAAGGTACTGGAAGATATCACTATTAGTTCATCCAGATAAATGCTCTCATCCACAAGCCCATCAAGCATTTATTAAATTAAATAAAGCTTTCAAAGAGTTACAAGATCCAGAAAAGCGGAAAGCAATGGATGAGAAAATCAAACAGAAGCAAGAACAGGAGGACTTTAAGGCTGAACTTAAAGTCATGCGAGAGGCTGCACTGTGGAGAAGATCCCAAGGTATATCCATGGATGGTGATGATGAGCTTCTGGCACAGACAGAGGTTAAAGTGGAACCCAAAAGAGATGAATGGATGACAACACTGCCTCCGGAGAGGAAACCTGGTGGTGTGTCTATGCAATCAACCCAATTTAGTCGGGGCTCAAAGGAAGGTAGAGGAGACACTAGTATTTGGACAGACACCCCTACTGACAGAGCCCAGAAAGCTAAGATGAATTATTTGGAAGCATACAACGAGGCTACTGCACTAGCCTCAAATGAAGAAGATAAGAAAAGGGCCAGTGCGGATGCAGATTTAGTGGACAAATACAACAAAGCAAAACGATCAAAAACATTGGTTCAAAAACATCAAGAAGAGGTTGCTAGCAAATCCAAGAAAAAGTCCAAGCAACAGACGGAAAAGGGAGAGTGGGTGGGTCAACATCCATGGAAGCCATGGGATCGTGAAAAGGATCTGACAGCTGGGAGGATGAAAGTAAAACTTGATGCAGAAGGCATGTCTGAGGGCTTAACTTCAAGGTTTTCTTCTGGTAACTTTCAAAGGAACTTCCTTTGA 1704 0.4278 MGDKRKKHRHQRDSTSPSSSSSPSIDSDSDSDRSSRRRRHRREKDRRRKTDGSSKRERESRRKEKRKKRDKERTKTKRRHYSDDSHSSDEESQPRLQPQIALREMITEFPNVGNDLMQILQMIDNGQAVDIKDISERSLVKHLKKLFISLNLKENGDRVFLLPSKAPPTLDVVGPLIQSYMHPTTEQADPSPPLHERCSVPTEQIIDDHSTDDHSVGPRKRVIGPAMPSAELLAAAAKLTEAHTEFKEAELDDDTELFIGPAPPAMVTEAESANDAERFEEVTRIMEVDIDSPYDVLGVNHNMSDVNIKKRYWKISLLVHPDKCSHPQAHQAFIKLNKAFKELQDPEKRKAMDEKIKQKQEQEDFKAELKVMREAALWRRSQGISMDGDDELLAQTEVKVEPKRDEWMTTLPPERKPGGVSMQSTQFSRGSKEGRGDTSIWTDTPTDRAQKAKMNYLEAYNEATALASNEEDKKRASADADLVDKYNKAKRSKTLVQKHQEEVASKSKKKSKQQTEKGEWVGQHPWKPWDREKDLTAGRMKVKLDAEGMSEGLTSRFSSGNFQRNFL 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01041 567 Coils Coil 496 516 - -
Car04g01041 567 ProSiteProfiles dnaJ domain profile. 292 356 IPR001623 -
Car04g01041 567 SMART dnaj_3 291 348 IPR001623 -
Car04g01041 567 CDD DnaJ 293 345 IPR001623 -
Car04g01041 567 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 567 - -
Car04g01041 567 Pfam Protein of unknown function (DUF3752) 412 558 IPR022226 -
Car04g01041 567 MobiDBLite consensus disorder prediction 60 75 - -
Car04g01041 567 MobiDBLite consensus disorder prediction 76 91 - -
Car04g01041 567 PRINTS DnaJ domain signature 294 312 IPR001623 -
Car04g01041 567 PRINTS DnaJ domain signature 312 327 IPR001623 -
Car04g01041 567 PRINTS DnaJ domain signature 328 348 IPR001623 -
Car04g01041 567 Pfam DnaJ domain 293 353 IPR001623 -
Car04g01041 567 MobiDBLite consensus disorder prediction 1 96 - -
Car04g01041 567 SUPERFAMILY Chaperone J-domain 262 350 IPR036869 -
Car04g01041 567 MobiDBLite consensus disorder prediction 408 447 - -
Car04g01041 567 Gene3D DnaJ domain 274 376 IPR036869 -
Car04g01041 567 MobiDBLite consensus disorder prediction 419 447 - -
Car04g01041 567 MobiDBLite consensus disorder prediction 490 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01041 Car-Chr4 10553333 10560401 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01041 - - gmx:100788598 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01041 04 10553333 10560401 Car04g01041 04 10553333 10560401 ECH