Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01017 ATGGTGTCATCTAACGACCCAGTTGAGTCTTTCTTCAATTCCATTCAAGTTATGAAGGAATCGCTGTCACCACTTGAAGTGGGTTTTCGTAAAGCTGCGAAGGATCTTGAGCATTGTTTTGCAGGTGCAAAGAACAGAGGAAATGGTGTTTGTTTGGTTGCTCAAGTGAGAGATGGTGGTGAATTTCAGATCTGTGATGTGAAGAAGAAAAAAGGGTTATCAATGAAGGTTCCTTTTAAGGCTATTTTGGGTATGTTTTCACAGAATTCAGGGAATGGGAATAAAACTCATGTGGTTAAGGAAAATGAAAATGGGTCTTCTTGTACCAATTGCTTGCAATTTTCTGTGACTTGGTCTTTGTTGGTTAATGGGTTTATTCAGTCTTTGCCAATTCCTTTTAAATCTGGGAAAAAGAGGTTTCAGAAAGTGTCTGATGAAGATAATAATAGTAATAAGGTTTGTTCATGCATGAAGCAAAGTATTTCAGCATTTGAAGTGAAAAATAATGAGTCTAAGGGTCAGTTTGCTAGAACAATTAAGGAAAAAGTTGCGAGGAAAAAAGATGGAAAACATGTTTCCATTGAATGCCTTATAGGTTTTATCTTTGATCAGTTATCTCATACACTTCAGAGTCTTGATCATGGAATCAATGGAATGCAAGAGAATAATAATAATGATTTTGATTGTGTGAAAACTTCATTGCCACAACCTTGTTCAGCTCCTTTTGGTCATGTGAATGCTTTCACAAGCTTCTTGGAAGAGCACAAAGTTGATGTGAATGGTTTCTTGGGGAATTTGAATTTTGCAAAGGTTGGTGTGCCATCGAGTGCAGCTGGAGAAGAAAGCCTTTCAACAAATGAAGGTGGAGATAATAATAGTAATAGTGTTAATGATGAAACTAAGGAAGAAAGTGTGGGAATTTCGGCGCAGAAGGTTGCCTCAAACATATTCAGTATTCCTTTAACGAATGTGGAGCGTTTAAAGACTACGCTTTCGACTGTTTCATTGACAGAGTTGATTGAACTGCTACCACAGCTGGGGAAAACAACGAAAGACCATCCTGATAAGAAGAAGCTATTCTCTGTACAAGATTTCTTTAGATACACAGAGTCCGAAGGGAGGAGATTCTTTGAGGAGCTGGATAGAGACGGTGATGGCCAAGTAACTTTAGAAGATTTAGAAATTGCAATGAGAAAGAGAAAGCTTCCACGAAGATATGCTAAAGAATTTATGAGCCGTACTAGAAGTCACTTATTTTCTAGGTCTTTTGGTTGGAAGCAATTCTTGTCATTCATGGAACAAAAGGAGCCAACAATTCTTCGCGCATACACTTCTTTGTGTTTAACCAAGTCAGGGACATTGAAGAAAATTGaaatattggagtcactaaagagttcaggactgcctgcaaatgaaGACAATGCTTTAGCTATGATGCGATTTTTAAATGCAGACACAGAAGAGTCTATTTCATATGGACATTTCCGTAATTTCATGATTCTGCTTCCCTCAGACCGTCTTCAAGAGGATCCTAGTGTTTTAAGGTCTGCATTGGCCGGTGGCCTTTCTTGTGCTCTGTCTTGCGCATTACTGCATCCAGTTGATTCAATCAAGACTCGAGTGCAAGCTTCAACCATGTCATTCCCTGAAATAATTGCTAAGCTGCCAGAGATCGGGACACGTGGTTTATACAGGGGTTCAATCCCTGCAATCCTTGGACAGTTTTCAAGTCATGGCCTTCGAACTGGGATATTTGAAGCGAGTAAATTGGTGTTGATAAATGTTGCTCCAAACTTACCTGAACTACAGGTACAATCTATAGCATCATTCTGTAGCACATTTTTGGGAACAGCTGTGCGAATCCCTTGCGAGGTGTTAAAGCAGAGATTGCAGGCTGGTCTTTTTGACAATGTGGGCGAGGCTTTGGTTGGTACTTGGCAGCAAGATGGTCTTAAAGGGTTTTTTCGTGGAACCGGAGCCACCCTTTGTCGAGAGGTTCCATTTTATGTTGCTGGCATGGGGCTTTATGCTGAATCTAAAAAGGGTGTCCAAAAACTACTAGGGCGGGAACTTGAGGCCTGGGAAACAATTGCAGTTGGAGCTTTATCCGGTGGTTTGGCGGCTGTTGTTACGACGCCGTTTGATGTGATGAAAACTAGAATGATGACTGCGCAGGGTCAGTCTGTGTCAATGACCTTGGTAGCGTTTTCTATACTCCGCCAAGAGGGACCCCTCGGCTTATTCAAAGGAGCAGTTCCTAGGTTCTTCTGGATTGCTCCTTTAGGTGCCATGAACTTTGCAGGTTATGAGTTAGCAAGGAAGGCCATGAATAAAAATGATGAGGCTAAGGCTGGAAATTTAGAGGAGTATGATACCTATTCATCTGATAAGTATAAAACCCTAAAACCCCAAAACTCAGCACCTCCATCAAATCTAATTCATAAACAAGTTGCTCGTCGCACTCAACTCAACGCCGCCGGAGTTGCTCGTCGTCTGCCGCAAACACTGATAATTTCCTTCAGTGGTAACAAAAATGGAAGAAGAAGATGA 2550 0.4031 MVSSNDPVESFFNSIQVMKESLSPLEVGFRKAAKDLEHCFAGAKNRGNGVCLVAQVRDGGEFQICDVKKKKGLSMKVPFKAILGMFSQNSGNGNKTHVVKENENGSSCTNCLQFSVTWSLLVNGFIQSLPIPFKSGKKRFQKVSDEDNNSNKVCSCMKQSISAFEVKNNESKGQFARTIKEKVARKKDGKHVSIECLIGFIFDQLSHTLQSLDHGINGMQENNNNDFDCVKTSLPQPCSAPFGHVNAFTSFLEEHKVDVNGFLGNLNFAKVGVPSSAAGEESLSTNEGGDNNSNSVNDETKEESVGISAQKVASNIFSIPLTNVERLKTTLSTVSLTELIELLPQLGKTTKDHPDKKKLFSVQDFFRYTESEGRRFFEELDRDGDGQVTLEDLEIAMRKRKLPRRYAKEFMSRTRSHLFSRSFGWKQFLSFMEQKEPTILRAYTSLCLTKSGTLKKIEILESLKSSGLPANEDNALAMMRFLNADTEESISYGHFRNFMILLPSDRLQEDPSVLRSALAGGLSCALSCALLHPVDSIKTRVQASTMSFPEIIAKLPEIGTRGLYRGSIPAILGQFSSHGLRTGIFEASKLVLINVAPNLPELQVQSIASFCSTFLGTAVRIPCEVLKQRLQAGLFDNVGEALVGTWQQDGLKGFFRGTGATLCREVPFYVAGMGLYAESKKGVQKLLGRELEAWETIAVGALSGGLAAVVTTPFDVMKTRMMTAQGQSVSMTLVAFSILRQEGPLGLFKGAVPRFFWIAPLGAMNFAGYELARKAMNKNDEAKAGNLEEYDTYSSDKYKTLKPQNSAPPSNLIHKQVARRTQLNAAGVARRLPQTLIISFSGNKNGRRR 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01017 849 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN-LIKE 130 511 - -
Car04g01017 849 Pfam Mitochondrial carrier protein 605 684 IPR018108 -
Car04g01017 849 Pfam Mitochondrial carrier protein 511 592 IPR018108 -
Car04g01017 849 Pfam Mitochondrial carrier protein 691 779 IPR018108 -
Car04g01017 849 ProSitePatterns EF-hand calcium-binding domain. 381 393 IPR018247 -
Car04g01017 849 SUPERFAMILY Mitochondrial carrier 510 770 IPR023395 -
Car04g01017 849 Gene3D - 332 510 - -
Car04g01017 849 Gene3D Mitochondrial carrier domain 518 792 IPR023395 -
Car04g01017 849 SUPERFAMILY EF-hand 373 502 IPR011992 -
Car04g01017 849 ProSiteProfiles Solute carrier (Solcar) repeat profile. 691 775 IPR018108 -
Car04g01017 849 MobiDBLite consensus disorder prediction 278 303 - -
Car04g01017 849 ProSiteProfiles Solute carrier (Solcar) repeat profile. 600 682 IPR018108 -
Car04g01017 849 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 512 781 - -
Car04g01017 849 ProSiteProfiles EF-hand calcium-binding domain profile. 368 403 IPR002048 GO:0005509
Car04g01017 849 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN-LIKE 512 781 - -
Car04g01017 849 ProSiteProfiles Solute carrier (Solcar) repeat profile. 511 591 IPR018108 -
Car04g01017 849 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 130 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01017 Car-Chr4 10308103 10318010 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01017 1 782 EF-hand Containing Proteins AT2G35800 62.185 0.0 1002
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01017 - - gmx:100807842 1244.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01017 04 10308103 10318010 Car04g01017 04 10308103 10318010 ECH