Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00924 ATGTGCTTAATTTGCAGAAACAGAGACAAAATGCAGAAAATGAAGAACCTTGGGAGTATTGGAAGCAGTGGGAGGCTATCAGCAGAAGAGTGTGAAGATGAGGATGTTTCAAAATTGGCCATTTCAGCATATCAAGCTAAGGAAGAAGAGATTGAGAGGAAAAAGATGGAGGTGAAAGAGAGAGTTGAGCTTCAACTTGGACGCGCTGAAGAAGAGACGAGGCGCTTGGCACACATTTGGGAAGAGCTTGAAGTGCTGGATGATCCTATGAGGAAGGAAGTTGCAATGATACGTAAGAAGATTGACTTGGCTAACAAAGATTTGAAGCAACTTGGACAGAACTACCAGAAAAAGGAGAAAGAGTATAAAGAAGCCTTGGAAACTTTCAATGAAAAGAACAAAGAGAAGACGCATTTGGTAGCGACACTAGCTGAGCTGTTGACTGAGAGTGAAAGACTGAGGATGAAGAAACTGGAGGAACTGTGCAAGACCGTAGAGTCCGTGTCACTAAAACAATAA 519 0.4239 MCLICRNRDKMQKMKNLGSIGSSGRLSAEECEDEDVSKLAISAYQAKEEEIERKKMEVKERVELQLGRAEEETRRLAHIWEELEVLDDPMRKEVAMIRKKIDLANKDLKQLGQNYQKKEKEYKEALETFNEKNKEKTHLVATLAELLTESERLRMKKLEELCKTVESVSLKQ 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00924 172 PANTHER RAB6-INTERACTING PROTEIN GORAB 11 167 IPR007033 -
Car04g00924 172 PANTHER RAB6-INTERACTING GOLGIN (DUF662) 11 167 - -
Car04g00924 172 Coils Coil 94 135 - -
Car04g00924 172 Coils Coil 41 61 - -
Car04g00924 172 Pfam Transcriptional activator 15 167 IPR007033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00924 Car-Chr4 9160004 9161947 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00924 - - gmx:100794044 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02583 03 71679451 71681551 Car04g00924 04 9160004 9161947 ECH
Car04g00924 04 9160004 9161947 Car04g00924 04 9160004 9161947 ECH